RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RIOX2Q8IUF8 465 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 SLC9A7Q96T83 725 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 FTH1P02794 183 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 THRBP10828 461 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 BMP7P18075 431 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 TLX1P31314 330 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 IDH3AP50213 366 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ZFP69Q49AA0 526 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ARL13AQ5H913 290 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 CHPFQ8IZ52 775 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 CNTD1Q8N815 330 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 LPPQ93052 612 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 FCRL2Q96LA5 508 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 UROC1Q96N76 676 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 GBA2Q9HCG7 927 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 C9P02748 559 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 SMIM10L2AP0DMW4 78 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 SMIM10L2BP0DMW5 78 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 RPS9P46781 194 aaKnown RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 NKD2Q969F2 451 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ATRNO75882 1429 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 SLC28A2O43868 658 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 TSPAN9O75954 239 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ADSLP30566 484 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 BHLHB9Q6PI77 547 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 TTYH3Q9C0H2 523 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ZNF490Q9ULM2 529 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 LRCH4O75427 683 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 SERPINB7O75635 380 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 AQP1P29972 269 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 AIF1P55008 147 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 BNC1Q01954 994 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 GBE1Q04446 702 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PUDPQ08623 228 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 ZNF781Q8N8C0 355 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 ZNF607Q96SK3 696 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 TIMM22Q9Y584 194 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 SPATA31C2B4DYI2 1134 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 LIPEQ05469 1076 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 LSM12Q3MHD2 195 aaKnown RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 TEX44Q53QW1 395 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 ZFYVE1Q9HBF4 777 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 OR5F1O95221 314 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 SLC26A9Q7LBE3 791 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PNPT1Q8TCS8 783 aaKnown RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 TPK1Q9H3S4 243 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PRDM8Q9NQV8 689 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 FBXO10Q9UK96 956 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 E7ENX8 843 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 CD48P09326 243 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 CREB1P16220 341 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 MAPK8P45983 427 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 FCHO2Q0JRZ9 810 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 BTG3Q14201 252 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 GPR158Q5T848 1215 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 METTL21CQ5VZV1 264 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 RAET1GQ6H3X3 334 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 FAM35AQ86V20 835 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 EZH1Q92800 747 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 BTBD9Q96Q07 612 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 MAT2BQ9NZL9 334 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 AP3D1O14617 1153 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 GRIN3BO60391 1043 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PAGE1O75459 146 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PPIBP23284 216 aaKnown RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 GRM3Q14832 879 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 ZNHIT3Q15649 155 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-213ENST00000638680 STRADAQ7RTN6 431 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PIK3C3Q8NEB9 887 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PPCDCQ96CD2 204 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 C1GALT1C1Q96EU7 318 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 TSSK3Q96PN8 268 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 PHF11Q9UIL8 331 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 MKL2Q9ULH7 1088 aa18.45■□□□□ 0.54
SCARB2-213ENST00000638680 AGLP35573 1532 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 BCL9O00512 1426 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 POU5F1Q01860 360 aaKnown RBP18.44■□□□□ 0.54
SCARB2-213ENST00000638680 CITED4Q96RK1 184 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 BCL2L14Q9BZR8 327 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 SLC39A8Q9C0K1 460 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 RACGAP1Q9H0H5 632 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 RMI1Q9H9A7 625 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 ABCB9Q9NP78 766 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 THG1LQ9NWX6 298 aaKnown RBP18.44■□□□□ 0.54
SCARB2-213ENST00000638680 PCDHGA4Q9Y5G9 962 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 PCDHAC2Q9Y5I4 1007 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 IQCMA0A1B0GVH7 501 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 LSM1O15116 133 aaKnown RBP18.44■□□□□ 0.54
SCARB2-213ENST00000638680 OMPP47874 163 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 RNASE12Q5GAN4 147 aaKnown RBP18.44■□□□□ 0.54
SCARB2-213ENST00000638680 RHBDF2Q6PJF5 856 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 TDRPQ86YL5 185 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 PDPRQ8NCN5 879 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 TEFMQ96QE5 360 aaKnown RBP18.44■□□□□ 0.54
SCARB2-213ENST00000638680 UNC93B1Q9H1C4 597 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 MUC13Q9H3R2 512 aa18.44■□□□□ 0.54
SCARB2-213ENST00000638680 GRHL1Q9NZI5 618 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms