RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 LHX6Q9UPM6 363 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 EPN1Q9Y6I3 576 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 LAMA5O15230 3695 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 ANKRD66B4E2M5 251 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 CASC3O15234 703 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 TCEA3O75764 348 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 ZRANB2O95218 330 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 SOD1P00441 154 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 MPOP05164 745 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 PECAM1P16284 738 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 POLD2P49005 469 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 GABREP78334 506 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 ILF3Q12906 894 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 SPIDRQ14159 915 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 PCSK7Q16549 785 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 TFDP3Q5H9I0 405 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 TRIM74Q86UV6 250 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 NRSN1Q8IZ57 195 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 GPR156Q8NFN8 814 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 CCHCR1Q8TD31 782 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 PTCD2Q8WV60 388 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 IMP4Q96G21 291 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 RBM41Q96IZ5 413 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 RIOK2Q9BVS4 552 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 GSDMCQ9BYG8 508 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 SLC25A51Q9H1U9 297 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 RABGEF1Q9UJ41 708 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 SLC17A4Q9Y2C5 497 aa16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 COL27A1Q8IZC6 1860 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-259ENST00000638114 CELSR3Q9NYQ7 3312 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 hCG_1818297A0A087WSY0 165 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 INPP4BO15327 924 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 TLX3O43711 291 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 NOBOXO60393 691 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 FUCA1P04066 466 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 PYGLP06737 847 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 IVLP07476 585 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 FECHP22830 423 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 ADCY2Q08462 1091 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 PRKD1Q15139 912 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 COL28A1Q2UY09 1125 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 TEX44Q53QW1 395 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 OGFOD3Q6PK18 319 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 SFTPA2Q8IWL1 248 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 RCOR2Q8IZ40 523 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 OR6C4Q8NGE1 309 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 GPBAR1Q8TDU6 330 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 KRT35Q92764 455 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 P3H4Q92791 437 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 HAUS1Q96CS2 278 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 AGAP2Q99490 1192 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 GLOD4Q9HC38 313 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 TRNAU1APQ9NX07 287 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 PKD2L2Q9NZM6 624 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 TMEM98Q9Y2Y6 226 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 ITPR1Q14643 2758 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 ADAMTS20P59510 1910 aa16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-259ENST00000638114 A0A087WV48 116 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 PTPN3P26045 913 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 AK4P27144 223 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 ACTN2P35609 894 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 SPINT3P49223 89 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 TBC1D25Q3MII6 688 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 C14orf28Q4W4Y0 310 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 C3orf38Q5JPI3 329 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 RAD9BQ6WBX8 426 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 MARK2Q7KZI7 788 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 LYSMD3Q7Z3D4 306 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 ZC3H18Q86VM9 953 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 NLRP8Q86W28 1048 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 NRROSQ86YC3 692 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 RAVER1Q8IY67 606 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 EXD1Q8NHP7 514 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 FGF11Q92914 225 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 ATXN7L3BQ96GX2 97 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 HIC2Q96JB3 615 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 OR2M4Q96R27 311 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 GFM1Q96RP9 751 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 TRIB3Q96RU7 358 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 CDH19Q9H159 772 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 POLR1BQ9H9Y6 1135 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 SPATS2LQ9NUQ6 558 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 ENTPD2Q9Y5L3 495 aa16.67■□□□□ 0.26
CACNA1A-259ENST00000638114 NTN3O00634 580 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 MTSS1O43312 755 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 PMPCBO75439 489 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 ASMTLO95671 621 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 SLC4A1P02730 911 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 RPLP0P05388 317 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 PIRTP0C851 137 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 GLB1P16278 677 aa16.66■□□□□ 0.26
CACNA1A-259ENST00000638114 ADCY8P40145 1251 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms