RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CELF1Q92879 486 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 TMEM186Q96B77 213 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 NMD3Q96D46 503 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 HES6Q96HZ4 224 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SNX27Q96L92 541 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ANKRD27Q96NW4 1050 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 FCRL3Q96P31 734 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 DGAT2Q96PD7 388 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TRNT1Q96Q11 434 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 INTS14Q96SY0 518 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PKP2Q99959 881 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 JPH2Q9BR39 696 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 CINPQ9BW66 212 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 BBS2Q9BXC9 721 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TLR10Q9BXR5 811 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TDRD1Q9BXT4 1180 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 TRIM54Q9BYV2 358 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MAGEB5Q9BZ81 275 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 GLIS2Q9BZE0 524 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 WDR11Q9BZH6 1224 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PITHD1Q9GZP4 211 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 FAM192AQ9GZU8 254 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CENPHQ9H3R5 247 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PCDH9Q9HC56 1237 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PRMT8Q9NR22 394 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 FBXO28Q9NVF7 368 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PAQR5Q9NXK6 330 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 BARHL2Q9NY43 387 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PRR13Q9NZ81 148 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 SH3BP4Q9P0V3 963 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LRIT1Q9P2V4 623 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 COPG2Q9UBF2 871 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 DNAJB11Q9UBS4 358 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 HESX1Q9UBX0 185 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 CGGBP1Q9UFW8 167 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 LIMA1Q9UHB6 759 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 CPA4Q9UI42 421 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ANAPC2Q9UJX6 822 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TDRKHQ9Y2W6 561 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 PTRH2Q9Y3E5 179 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 STRAPQ9Y3F4 350 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 SIT1Q9Y3P8 196 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TCAF1Q9Y4C2 921 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 ZNF451Q9Y4E5 1061 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TELO2Q9Y4R8 837 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PCDHB6Q9Y5E3 794 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 COPG1Q9Y678 874 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 CFAP20Q9Y6A4 193 aaKnown RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 NCOA3Q9Y6Q9 1424 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ADCY9O60503 1353 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 TTC21AQ8NDW8 1320 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 TMEM120BA0PK00 339 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 C9orf118A6NHY6 69 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 GOLGA8RI6L899 631 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 HIP1O00291 1037 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CTDSP2O14595 271 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ZNF197O14709 1029 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 TSPAN4O14817 238 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ZNF185O15231 689 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 TNFSF14O43557 240 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 HCRTR2O43614 444 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 MED24O75448 989 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 TADA2AO75478 443 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ECI2O75521 394 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CRCPO75575 148 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 AKAP3O75969 853 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 KRT36O76013 467 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CDK14O94921 469 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ZNF202O95125 648 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 SIX3O95343 332 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 OR2C1O95371 312 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 AGTP01019 485 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 PENKP01210 267 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 CYP21A2P08686 494 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 IGFBP1P08833 259 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 IFNGR1P15260 489 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 PDE6AP16499 860 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 GJA1P17302 382 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ERCC2P18074 760 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CD40P25942 277 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CD1BP29016 333 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 SLC11A2P49281 568 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 SMSP52788 366 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 MRPL12P52815 198 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 BCAT1P54687 386 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 MANFP55145 182 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 CDH8P55286 799 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 SNU13P55769 128 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 EIF3BP55884 814 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 ITGA1P56199 1179 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 ATP5IP56385 69 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 GPX6P59796 221 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 RPS8P62241 208 aaKnown RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 PPP2CBP62714 309 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 PPP2CAP67775 309 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 LACTBP83111 547 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 ABHD18Q0P651 414 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 CALCOCO2Q13137 446 aa3.02□□□□□ -1.93
VIM-210ENST00000637053 MSLNQ13421 630 aaPredicted RBP3.02□□□□□ -1.93
VIM-210ENST00000637053 SNTB2Q13425 540 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms