RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 VPS41P49754 854 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TPMTP51580 245 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ITGA8P53708 1063 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ACVR1Q04771 509 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 DPTQ07507 201 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 FRG1Q14331 258 aaKnown RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PCSK7Q16549 785 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SETMARQ53H47 684 aaPredicted RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PCID2Q5JVF3 399 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SIRPB2Q5JXA9 342 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 DENND5AQ6IQ26 1287 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 CENPUQ71F23 418 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 GLT6D1Q7Z4J2 308 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TTC7BQ86TV6 843 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 NRSN1Q8IZ57 195 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZBTB44Q8NCP5 570 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PPHLN1Q8NEY8 458 aaKnown RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 CXorf40AQ8TE69 158 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 STYXQ8WUJ0 223 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PDCD6IPQ8WUM4 868 aaKnown RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 GAB3Q8WWW8 586 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 TTC25Q96NG3 672 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 LENG8Q96PV6 779 aaPredicted RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 HHIPQ96QV1 700 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 FMO2Q99518 471 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SEMA4AQ9H3S1 761 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 C10orf88Q9H8K7 445 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZFYVE1Q9HBF4 777 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PCDH12Q9NPG4 1184 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZSCAN32Q9NX65 697 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 GRHL1Q9NZI5 618 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PKD2L2Q9NZM6 624 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 B4GALT6Q9UBX8 382 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 APPL1Q9UKG1 709 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SARDHQ9UL12 918 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 SOX13Q9UN79 622 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 CHKBQ9Y259 395 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 PKP3Q9Y446 797 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF711Q9Y462 761 aa6.72□□□□□ -1.33
UPF3B-205ENST00000636792 THADAQ6YHU6 1953 aa6.71□□□□□ -1.33
UPF3B-205ENST00000636792 BDP1A6H8Y1 2624 aa6.71□□□□□ -1.33
UPF3B-205ENST00000636792 C1orf232A0A0U1RR37 186 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 FAM237BA0A1B0GVD1 139 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 DCDC2BA2VCK2 349 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 NPIPB15A6NHN6 443 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 SDR42E2A6NKP2 422 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 NEMP1O14524 444 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TP73O15350 636 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 PI15O43692 258 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 LILRB5O75023 590 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TM7SF2O76062 418 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 USP1O94782 785 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ETS1P14921 441 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 CD33P20138 364 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 LPOP22079 712 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ALAS2P22557 587 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 GKP32189 559 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 PPARGP37231 505 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 NUMBP49757 651 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 STC1P52823 247 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 GUCY2DQ02846 1103 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 CNTN1Q12860 1018 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 OVGP1Q12889 678 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 RALGDSQ12967 914 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 MSLNQ13421 630 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ITGA9Q13797 1035 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 GALNT3Q14435 633 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 SLMAPQ14BN4 828 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ANGPT1Q15389 498 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TRIP13Q15645 432 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ELF2Q15723 593 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 SKIDA1Q1XH10 827 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 MAP9Q49MG5 647 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 CCDC38Q502W7 563 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 AARS2Q5JTZ9 985 aaKnown RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TEX35Q5T0J7 233 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 FAXCQ5TGI0 409 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 KIAA0895LQ68EN5 471 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 KIAA0930Q6ICG6 404 aaPredicted RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 LIPIQ6XZB0 460 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 CYS1Q717R9 158 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TMC3Q7Z5M5 1100 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TMEM135Q86UB9 458 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 IQCHQ86VS3 1027 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 HORMAD1Q86X24 394 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ZSWIM9Q86XI8 627 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 MPP5Q8N3R9 675 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 OR52K1Q8NGK4 314 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 FBXO25Q8TCJ0 367 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 CALML6Q8TD86 181 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 HEXDCQ8WVB3 486 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.71□□□□□ -1.345e-7■■■■■ 55
UPF3B-205ENST00000636792 LOXL4Q96JB6 756 aa6.71□□□□□ -1.34
UPF3B-205ENST00000636792 ZC3H10Q96K80 434 aaKnown RBP6.71□□□□□ -1.34
UPF3B-205ENST00000636792 NSMCE3Q96MG7 304 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms