RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 JAMLQ86YT9 394 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 VSTM4Q8IW00 320 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 RHOT2Q8IXI1 618 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 CCL4L1Q8NHW4 92 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 CCHCR1Q8TD31 782 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 GPBAR1Q8TDU6 330 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 HDAC11Q96DB2 347 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 PCDH9Q9HC56 1237 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 TAAR2Q9P1P5 351 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 RPL26L1Q9UNX3 145 aaKnown RBP17.87■□□□□ 0.45
PNKP-225ENST00000636214 RNF215Q9Y6U7 377 aa17.87■□□□□ 0.45
PNKP-225ENST00000636214 A0A1W2PQM1 296 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 FZD6O60353 706 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 HLA-DQB2P05538 268 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 ZFXP17010 805 aaPredicted RBP17.86■□□□□ 0.45
PNKP-225ENST00000636214 PPM1FP49593 454 aaPredicted RBP17.86■□□□□ 0.45
PNKP-225ENST00000636214 HLTFQ14527 1009 aaKnown RBP eCLIP17.86■□□□□ 0.45
PNKP-225ENST00000636214 ADAMTSL4Q6UY14 1074 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 ZNF765Q7L2R6 523 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 SPRED1Q7Z699 444 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 TECPR1Q7Z6L1 1165 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 B3GNT8Q7Z7M8 397 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 CNGA4Q8IV77 575 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 NRSN1Q8IZ57 195 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 PQLC3Q8N755 202 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 RNF157Q96PX1 679 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 OR2M4Q96R27 311 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 ZMYND15Q9H091 742 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 ABCG8Q9H221 673 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 HEY1Q9Y5J3 304 aa17.86■□□□□ 0.45
PNKP-225ENST00000636214 C1orf232A0A0U1RR37 186 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 APOL1O14791 398 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PPP1R12AO14974 1030 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 CASC3O15234 703 aaKnown RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 MFAP3LO75121 409 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ASMTLO95671 621 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 JCHAINP01591 159 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 KRT1P04264 644 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 CCKBRP32239 447 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ACTR1BP42025 376 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ACTR1AP61163 376 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PTSQ03393 145 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 AP1B1Q10567 949 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PTPRRQ15256 657 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ASTE1Q2TB18 679 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 AMZ1Q400G9 498 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PHF19Q5T6S3 580 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ARHGAP40Q5TG30 622 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 CLEC14AQ86T13 490 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 VSIG1Q86XK7 387 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 RFX6Q8HWS3 928 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 GALNT13Q8IUC8 556 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 CBARPQ8N350 705 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 RNF214Q8ND24 703 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 SLC39A7Q92504 469 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 RAPGEF5Q92565 580 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 TMEM159Q96B96 161 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 BBC3Q96PG8 261 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 ADGRE3Q9BY15 652 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 NHEJ1Q9H9Q4 299 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 DTLQ9NZJ0 730 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PKD2L2Q9NZM6 624 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 SEPT10Q9P0V9 454 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 PISDQ9UG56 409 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 ATXN7L1Q9ULK2 861 aaPredicted RBP17.85■□□□□ 0.45
PNKP-225ENST00000636214 SLC17A4Q9Y2C5 497 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 LOXL2Q9Y4K0 774 aa17.85■□□□□ 0.45
PNKP-225ENST00000636214 A0A1W2PNU3 283 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 CDRT15L2A8MXV6 281 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 ZNF487B1APH4 448 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 ATXN7O15265 892 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 TNNT1P13805 278 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 AK4P27144 223 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 ALDH4A1P30038 563 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 UGT1A5P35504 534 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 ADCY8P40145 1251 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 CD86P42081 329 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 SLC1A1P43005 524 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 POLD2P49005 469 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 STC1P52823 247 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 MAZP56270 477 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 CTBSQ01459 385 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 PPIDQ08752 370 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 PDK1Q15118 436 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 TAF1BQ53T94 588 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 MARK2Q7KZI7 788 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 PIM3Q86V86 326 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 RAVER1Q8IY67 606 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 EXD1Q8NHP7 514 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 LRRN4Q8WUT4 740 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 SCAMP4Q969E2 229 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 PRR11Q96HE9 360 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 CMKLR1Q99788 373 aa17.84■□□□□ 0.45
PNKP-225ENST00000636214 MLPHQ9BV36 600 aaPredicted RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 RIOK2Q9BVS4 552 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 SPATS2LQ9NUQ6 558 aaKnown RBP17.84■□□□□ 0.45
PNKP-225ENST00000636214 DDX56Q9NY93 547 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms