RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 OTCP00480 354 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 SLC6A2P23975 617 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 NAXEQ8NCW5 288 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
CLN5-208ENST00000636183 KBTBD4Q9NVX7 518 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 CNOT6Q9ULM6 557 aaKnown RBP16.07■□□□□ 0.16
CLN5-208ENST00000636183 PTCH2Q9Y6C5 1203 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 A0A075B6Q4 140 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 A0A1W2PRU2 124 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 RARAP10276 462 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 PAX3P23760 479 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 GRM5P41594 1212 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 ACTR3P61158 418 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 CCZ1BP86790 482 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 CCZ1P86791 482 aaPredicted RBP16.07■□□□□ 0.16
CLN5-208ENST00000636183 GRM2Q14416 872 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 OTOP3Q7RTS5 596 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 ARMCX1Q9P291 453 aa16.07■□□□□ 0.16
CLN5-208ENST00000636183 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ACADLP28330 430 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 SLC30A6Q6NXT4 461 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 PPP3R2Q96LZ3 170 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 THAP1Q9NVV9 213 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 RPS6KA6Q9UK32 745 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 SIGLEC16A6NMB1 481 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 SPATA31C2B4DYI2 1134 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 H7C0S8 307 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TMCC2O75069 709 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ARF4P18085 180 aaPredicted RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 CCNOP22674 350 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 CLCN5P51795 746 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 PKNOX1P55347 436 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TLE2Q04725 743 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 MZT2AQ6P582 158 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TMPRSS9Q7Z410 1059 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ULK2Q8IYT8 1036 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 KIAA0895Q8NCT3 520 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 QKIQ96PU8 341 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN5-208ENST00000636183 DGCR6LQ9BY27 220 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 CLEC4AQ9UMR7 237 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 TRIM64BA6NI03 449 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 GNB5O14775 395 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 USP2O75604 605 aaPredicted RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 SLC5A3P53794 718 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 SEC23AQ15436 765 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 XAGE5Q8WWM1 108 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TMEM27Q9HBJ8 222 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 RAI2Q9Y5P3 530 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 PTENP60484 403 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TRIM40Q6P9F5 258 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ADAMTSL2Q86TH1 951 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 TMEM125Q96AQ2 219 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 USB1Q9BQ65 265 aaKnown RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 UNC13BO14795 1591 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 APOC4-APOC2K7ER74 178 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 PDE5AO76074 875 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 INMTO95050 263 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 APOC2P02655 101 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 CHRNGP07510 517 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ERCC2P18074 760 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 LRRC32Q14392 662 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 RNASE12Q5GAN4 147 aaKnown RBP16.06■□□□□ 0.16
CLN5-208ENST00000636183 TMC8Q8IU68 726 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 SLC22A15Q8IZD6 547 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 MYCBPAPQ8TBZ2 947 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 BTN2A3PQ96KV6 586 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 C12orf66Q96MD2 445 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 DSN1Q9H410 356 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 IKZF3Q9UKT9 509 aa16.06■□□□□ 0.16
CLN5-208ENST00000636183 RFXANKO14593 260 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 CLOCKO15516 846 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 PDE9AO76083 593 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 TNFP01375 233 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 HOXB8P17481 243 aaPredicted RBP16.05■□□□□ 0.16
CLN5-208ENST00000636183 MYL9P24844 172 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 PBX3P40426 434 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 PTPN5P54829 565 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
CLN5-208ENST00000636183 RHBDF2Q6PJF5 856 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 CRTAC1Q9NQ79 661 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 ABCB8Q9NUT2 735 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 POLR3HQ9Y535 204 aaPredicted RBP16.05■□□□□ 0.16
CLN5-208ENST00000636183 PXDNLA1KZ92 1463 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 FOSL2P15408 326 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 ZNF143P52747 638 aaPredicted RBP16.05■□□□□ 0.16
CLN5-208ENST00000636183 ARFIP1P53367 373 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 PPP2R2BQ00005 443 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 TRAF3Q13114 568 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 ZNF846Q147U1 533 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
CLN5-208ENST00000636183 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms