RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 DNAJC3Q13217 504 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 ILKQ13418 452 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 PRPSAP1Q14558 356 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 ADAMTSL4Q6UY14 1074 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 TMC3Q7Z5M5 1100 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 HEATR4Q86WZ0 1026 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 GLMNQ92990 594 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 RIOK2Q9BVS4 552 aaKnown RBP16.69■□□□□ 0.26
UBE3D-208ENST00000626828 SCNM1Q9BWG6 230 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 GPR63Q9BZJ6 419 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 CDH19Q9H159 772 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 RAD18Q9NS91 495 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 GOLGA6AQ9NYA3 693 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 NCKIPSDQ9NZQ3 722 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 CD84Q9UIB8 345 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 DOLKQ9UPQ8 538 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 AAR2Q9Y312 384 aaKnown RBP16.69■□□□□ 0.26
UBE3D-208ENST00000626828 ACACBO00763 2458 aa16.69■□□□□ 0.26
UBE3D-208ENST00000626828 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 FAM221BA6H8Z2 402 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 C5orf60A6NFR6 353 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 YY2O15391 372 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 HYAL3O43820 417 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CKMT1AP12532 417 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 ACP1P24666 158 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 STIP1P31948 543 aaKnown RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CDK3Q00526 305 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CCDC157Q569K6 752 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 ZCCHC8Q6NZY4 707 aaKnown RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 LYSMD3Q7Z3D4 306 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 OR1E3Q8WZA6 343 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 OXNAD1Q96HP4 312 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 MRGPRX2Q96LB1 330 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 APOLD1Q96LR9 279 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 SPATA13Q96N96 652 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 LRRC61Q9BV99 259 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 FRMD8P1Q9BZ68 369 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CLPBQ9H078 707 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 GBA3Q9H227 469 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CARD9Q9H257 536 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 CYP4F12Q9HCS2 524 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 MOSPD1Q9UJG1 213 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 SHOC2Q9UQ13 582 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
UBE3D-208ENST00000626828 RFPL3O75679 317 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 TOP3BO95985 862 aaKnown RBP16.67■□□□□ 0.26
UBE3D-208ENST00000626828 CEACAM5P06731 702 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 PIRTP0C851 137 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 HLA-DPA1P20036 260 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 ACADVLP49748 655 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 E2F1Q01094 437 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 DEFB133Q30KQ1 61 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 SLC13A5Q86YT5 568 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-208ENST00000626828 GALNT15Q8N3T1 639 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 IPMKQ8NFU5 416 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 SLC35B2Q8TB61 432 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 HIC2Q96JB3 615 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 FGF22Q9HCT0 170 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 HACD3Q9P035 362 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 R3HDM2Q9Y2K5 976 aaKnown RBP16.67■□□□□ 0.26
UBE3D-208ENST00000626828 MSRB2Q9Y3D2 182 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 ZNF711Q9Y462 761 aa16.67■□□□□ 0.26
UBE3D-208ENST00000626828 CEP295Q9C0D2 2601 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 TCRBV7S2A1N4TA0A589 114 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 PRSS38A1L453 326 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 F5H423 210 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-208ENST00000626828 SOD1P00441 154 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 RPIAP49247 311 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 SLC1A5Q15758 541 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 PARP6Q2NL67 630 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 SIRPB2Q5JXA9 342 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 RANBP10Q6VN20 620 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 TMPRSS7Q7RTY8 843 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 SLC25A41Q8N5S1 370 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 LRRC45Q96CN5 670 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 EID2BQ96D98 161 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 WDR24Q96S15 920 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 AGAP2Q99490 1192 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 FSD1LQ9BXM9 530 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 FRMD8Q9BZ67 464 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-208ENST00000626828 MRPL40Q9NQ50 206 aaKnown RBP16.66■□□□□ 0.26
UBE3D-208ENST00000626828 SLC17A4Q9Y2C5 497 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 CHD8Q9HCK8 2581 aa16.66■□□□□ 0.26
UBE3D-208ENST00000626828 RP1P56715 2156 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 AGTP01019 485 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 FGF1P05230 155 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 SPINK2P20155 84 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 HMGCLP35914 325 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 SMAD1Q15797 465 aaKnown RBP16.65■□□□□ 0.26
UBE3D-208ENST00000626828 C6orf132Q5T0Z8 1188 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
UBE3D-208ENST00000626828 DHRS13Q6UX07 377 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 ARHGEF18Q6ZSZ5 1173 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 NYAP1Q6ZVC0 841 aa16.65■□□□□ 0.26
UBE3D-208ENST00000626828 TAF8Q7Z7C8 310 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms