RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 KRT1P04264 644 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ELFN1P0C7U0 828 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 CYP2A6P11509 494 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 C6P13671 934 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 EDN3P14138 238 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ZFXP17010 805 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 CKMT2P17540 419 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ITIH2P19823 946 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 CA4P22748 312 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 DGKAP23743 735 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 IL4RP24394 825 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 CCNCP24863 283 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 MAP4P27816 1152 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 HNF1BP35680 557 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 GARSP41250 739 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 RGRP47804 291 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ARL4DP49703 201 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 LIG3P49916 1009 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 BLKP51451 505 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 DUSP3P51452 185 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 ZNF75DP51815 510 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 NAP1L1P55209 391 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 TAS2R40P59535 323 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 FGL2Q14314 439 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ACOX1Q15067 660 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PAFAH1B3Q15102 231 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 ST3GAL2Q16842 350 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ZNF542PQ5EBM4 170 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ARMC12Q5T9G4 340 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 FAXCQ5TGI0 409 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 LRRC38Q5VT99 294 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 NCBP2-AS2Q69YL0 99 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 FDX2Q6P4F2 183 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 UNQ6494/PRO21346Q6UXR6 183 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 RFX6Q8HWS3 928 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 TMTC1Q8IUR5 882 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 RHOT1Q8IXI2 618 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
TCF4-249ENST00000625716 TC2NQ8N9U0 490 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PCDH19Q8TAB3 1148 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 LMX1AQ8TE12 382 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 CENPTQ96BT3 561 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 MRFAP1L1Q96HT8 127 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 RNF157Q96PX1 679 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PANX2Q96RD6 677 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 KLF6Q99612 283 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 IL12RB2Q99665 862 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 SLC13A1Q9BZW2 595 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 POLR1EQ9GZS1 481 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 SOX17Q9H6I2 414 aaPredicted RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 NT5MQ9NPB1 228 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 RBM22Q9NW64 420 aaKnown RBP eCLIP6.42□□□□□ -1.38
TCF4-249ENST00000625716 KCTD5Q9NXV2 234 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 SPASTQ9UBP0 616 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 KLK13Q9UKR3 277 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PHTF1Q9UMS5 762 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 COQ6Q9Y2Z9 468 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.42□□□□□ -1.38
TCF4-249ENST00000625716 MSRB2Q9Y3D2 182 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 TTLL3Q9Y4R7 772 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PCDHGA1Q9Y5H4 931 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 PCDHA13Q9Y5I0 950 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 HEY1Q9Y5J3 304 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 GON4LQ3T8J9 2241 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 NUMA1Q14980 2115 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PLXNA2O75051 1894 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 CACNB4O00305 520 aaPredicted RBP6.41□□□□□ -1.38
TCF4-249ENST00000625716 TRAFD1O14545 582 aaPredicted RBP6.41□□□□□ -1.38
TCF4-249ENST00000625716 APOL1O14791 398 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PPP1R12AO14974 1030 aaPredicted RBP6.41□□□□□ -1.38
TCF4-249ENST00000625716 MUSKO15146 869 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 AQP9O43315 295 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 SIGLEC6O43699 453 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 MFSD11O43934 449 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 RFPL3O75679 317 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PIAS2O75928 621 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 CSF2P04141 144 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PRKCGP05129 697 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 F13BP05160 661 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PCCBP05166 539 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PROS1P07225 676 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 CTSEP14091 401 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 CCNB1P14635 433 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 JUPP14923 745 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
TCF4-249ENST00000625716 COMTP21964 271 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 KELP23276 732 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 VIPR1P32241 457 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 IGFALSP35858 605 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 MMP12P39900 470 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PEX5P50542 639 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 ARSEP51690 589 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 EPHB1P54762 984 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 PFN3P60673 137 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 MAXP61244 160 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 E2F1Q01094 437 aa6.41□□□□□ -1.38
TCF4-249ENST00000625716 SEMG2Q02383 582 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms