RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 L3HYPDHQ96EM0 354 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 PTCD3Q96EY7 689 aaKnown RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 LRIG1Q96JA1 1093 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 BTBD10Q9BSF8 475 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 NMUR2Q9GZQ4 415 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 POMKQ9H5K3 350 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 RAD18Q9NS91 495 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 HCFC1R1Q9NWW0 138 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 EVLQ9UI08 416 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 OAS3Q9Y6K5 1087 aaKnown RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 CAPN14A8MX76 684 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 HGSO14964 777 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 RFPL2O75678 378 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 MT-CO1P00395 513 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 T-ENOLP0DO92 83 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 TFEBP19484 476 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 IMPDH1P20839 514 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 IDH3AP50213 366 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 CDKN2DP55273 166 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 ELF3P78545 371 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 DLG1Q12959 904 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ZNF460Q14592 562 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 DNAL1Q4LDG9 190 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ATXN7L2Q5T6C5 722 aaPredicted RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 SNX20Q7Z614 316 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ISCA2Q86U28 154 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 TMPRSS6Q8IU80 811 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 PARP9Q8IXQ6 854 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 TTC16Q8NEE8 873 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 HCAR2Q8TDS4 363 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 KIAA1191Q96A73 305 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 CMTM5Q96DZ9 223 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 NSMCE3Q96MG7 304 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 TM6SF2Q9BZW4 377 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 COG4Q9H9E3 785 aa16.3■□□□□ 0.2
LDB3-208ENST00000623007 MRPS23Q9Y3D9 190 aaKnown RBP16.3■□□□□ 0.2
LDB3-208ENST00000623007 WASH3PC4AMC7 463 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 NEDD8-MDP1E9PL57 170 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 GYG2O15488 501 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 WFS1O76024 890 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 PIGNO95427 931 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 TYRP14679 529 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 CD1DP15813 335 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 SLC8A1P32418 973 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 GPM6BQ13491 265 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 SNCBQ16143 134 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 ARL13AQ5H913 290 aaPredicted RBP16.29■□□□□ 0.2
LDB3-208ENST00000623007 ZNF549Q6P9A3 640 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 TXNDC11Q6PKC3 985 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 NAPRTQ6XQN6 538 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 TPRG1Q6ZUI0 275 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 CAMK1DQ8IU85 385 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 RBFAQ8N0V3 343 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 RYBPQ8N488 228 aaPredicted RBP16.29■□□□□ 0.2
LDB3-208ENST00000623007 ZNF781Q8N8C0 355 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 BHMTQ93088 406 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 SLC7A6OSQ96CW6 309 aaPredicted RBP16.29■□□□□ 0.2
LDB3-208ENST00000623007 SCRN2Q96FV2 425 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 CCDC106Q9BWC9 280 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 OSBPL1AQ9BXW6 950 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 SUV39H2Q9H5I1 410 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 DZANK1Q9NVP4 752 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 PNPOQ9NVS9 261 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 PLK2Q9NYY3 685 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 FKBPLQ9UIM3 349 aa16.29■□□□□ 0.2
LDB3-208ENST00000623007 TRMT6Q9UJA5 497 aaKnown RBP16.29■□□□□ 0.2
LDB3-208ENST00000623007 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
LDB3-208ENST00000623007 A8MT66 165 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 CCL22O00626 93 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 ZNF195O14628 629 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 PRMT5O14744 637 aaPredicted RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 BUD23O43709 281 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 DIAPH2O60879 1101 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 KERAO60938 352 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 ADH1CP00326 375 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 SRPRAP08240 638 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 EPCAMP16422 314 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 ZNF30P17039 623 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 PTPRNQ16849 979 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 ALYREFQ86V81 257 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 RAVER1Q8IY67 606 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 CFAP61Q8NHU2 1237 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 GRIN3AQ8TCU5 1115 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 DTX3LQ8TDB6 740 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 TCEAL4Q96EI5 215 aa16.28■□□□□ 0.2
LDB3-208ENST00000623007 PDLIM5Q96HC4 596 aaKnown RBP16.28■□□□□ 0.2
LDB3-208ENST00000623007 ABHD8Q96I13 439 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms