RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZNF707Q96C28 371 aaPredicted RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 EGFL8Q99944 293 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 KIFC1Q9BW19 673 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 PIF1Q9H611 641 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 KIAA1522Q9P206 1035 aaPredicted RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 ZFP69BQ9UJL9 534 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 H3BMM5 538 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 FFAR3O14843 346 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 GPR42O15529 346 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 EFCAB14O75071 495 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 SORBS2O94875 1100 aaKnown RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 PCDH8O95206 1070 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 CES1P23141 567 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 BTKQ06187 659 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 ZNF549Q6P9A3 640 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 CILP2Q8IUL8 1156 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 CENPLQ8N0S6 344 aaPredicted RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 MAPK15Q8TD08 544 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 KCNV2Q8TDN2 545 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 TRPC4APQ8TEL6 797 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 SAMD11Q96NU1 681 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 TNFRSF12AQ9NP84 129 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 COPG2Q9UBF2 871 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 INVSQ9Y283 1065 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 PRSS21Q9Y6M0 314 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 SPAG6O75602 509 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 MLNP12872 115 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 EZRP15311 586 aaKnown RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 FSHRP23945 695 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 SERPINB8P50452 374 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 RAB10P61026 200 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 PCLAFQ15004 111 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 ACOX1Q15067 660 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 TCHHL1Q5QJ38 904 aaPredicted RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 SH2D4BQ5SQS7 431 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 GRTP1Q5TC63 336 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 SDCCAG8Q86SQ7 713 aaPredicted RBP10.51□□□□□ -0.73
VPS11-208ENST00000621676 RELL1Q8IUW5 271 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 DDIASQ8IXT1 998 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 HERVK_113Q902F9 699 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 ADGRE3Q9BY15 652 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 FZD3Q9NPG1 666 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 NCKIPSDQ9NZQ3 722 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 IKZF3Q9UKT9 509 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 ASPMQ8IZT6 3477 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 KNTC1P50748 2209 aa10.51□□□□□ -0.73
VPS11-208ENST00000621676 DLX3O60479 287 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 BPGMP07738 259 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 LPOP22079 712 aaPredicted RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 ETV4P43268 484 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ST8SIA6P61647 398 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ARHGEF7Q14155 803 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 TNFAIP8L3Q5GJ75 292 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CRTC3Q6UUV7 619 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 BRSK1Q8TDC3 778 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 RHOJQ9H4E5 214 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 BRD9Q9H8M2 597 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 PDFQ9HBH1 243 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CD93Q9NPY3 652 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 VPS45Q9NRW7 570 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 LHX3Q9UBR4 397 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 LIMD1Q9UGP4 676 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 NDRG2Q9UN36 371 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 PSMD13Q9UNM6 376 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 MMP20O60882 483 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 S1PR4O95977 384 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 PRDX3P30048 256 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 PPP1R3AQ16821 1122 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 PRAMEF14Q5SWL7 426 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 SERPINA9Q86WD7 417 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 PGBD3Q8N328 593 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 GPR26Q8NDV2 337 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 OR2AP1Q8NGE2 309 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 LKAAEAR1Q8TD35 194 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 DTX3LQ8TDB6 740 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 DDX50Q9BQ39 737 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 ACAT2Q9BWD1 397 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 SLC25A13Q9UJS0 675 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CRCPO75575 148 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 SLC25A14O95258 325 aaPredicted RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 STATHP02808 62 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 SCTRP47872 440 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 NEK3P51956 506 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 DDX39BQ13838 428 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 MRNIPQ6NTE8 343 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CCDC91Q7Z6B0 441 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 RIBC1Q8N443 379 aaPredicted RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 PTERQ96BW5 349 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 CDK5RAP1Q96SZ6 601 aaKnown RBP10.5□□□□□ -0.73
VPS11-208ENST00000621676 DHRS4Q9BTZ2 278 aa10.5□□□□□ -0.73
VPS11-208ENST00000621676 ATG10Q9H0Y0 220 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms