RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 USP45Q70EL2 814 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 CDYL2Q8N8U2 506 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TBL1YQ9BQ87 522 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 DPEP2Q9H4A9 486 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 PCDH10Q9P2E7 1040 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SRRDQ9UH36 339 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 AGO1Q9UL18 857 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SORCS3Q9UPU3 1222 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 GIT1Q9Y2X7 761 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 NCAM2O15394 837 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 CDK14O94921 469 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 PPM1AP35813 382 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MATKP42679 507 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 IL27RAQ6UWB1 636 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 ARMCX6Q7L4S7 300 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MON1AQ86VX9 555 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 UNC93AQ86WB7 457 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM126BQ8IXS8 530 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MICU2Q8IYU8 434 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 C12orf76Q8N812 135 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 OR9Q1Q8NGQ5 310 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 FIG4Q92562 907 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 GATA6Q92908 595 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 TPD52L3Q96J77 140 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 MAF1Q9H063 256 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SMG9Q9H0W8 520 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 NSMCE4AQ9NXX6 385 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 BTRCQ9Y297 605 aa8.28□□□□□ -1.08
PTPDC1-204ENST00000620992 SMIM35A0A1B0GVV1 85 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CNMDO75829 334 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 MT-CYBP00156 380 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CPOXP36551 454 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 AQP4P55087 323 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PKNOX1P55347 436 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 NRG1Q02297 640 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 NIPAL4Q0D2K0 466 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SLC9B1Q4ZJI4 515 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 TIGD5Q53EQ6 642 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ANKS6Q68DC2 871 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 MAVSQ7Z434 540 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SLAIN1Q8ND83 568 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 UTP15Q8TED0 518 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 BBS4Q96RK4 519 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 KLHL4Q9C0H6 718 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CACNA1CQ13936 2221 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 HACD1B0YJ81 288 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 C9JVG2 144 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 OR56A5P0C7T3 313 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ELFN1P0C7U0 828 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 COX4I1P13073 169 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 EPHA3P29320 983 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ARRB2P32121 409 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ACSM2AQ08AH3 577 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GSTA3Q16772 222 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SFT2D3Q587I9 215 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 DEPDC1Q5TB30 811 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ACSM2BQ68CK6 577 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 FSTL4Q6MZW2 842 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PCDH20Q8N6Y1 951 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 NAT14Q8WUY8 206 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 FCRL3Q96P31 734 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 BTBD9Q96Q07 612 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SORT1Q99523 831 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CPNE1Q99829 537 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SIKE1Q9BRV8 207 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 HGH1Q9BTY7 390 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 DUSP16Q9BY84 665 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 DPY30Q9C005 99 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 C1orf21Q9H246 121 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 TCF7L2Q9NQB0 619 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 POMPQ9Y244 141 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PARP14Q460N5 1801 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 YJEFN3A6XGL0 299 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PIGNO95427 931 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GSRP00390 522 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 HSMCR30P0CW71 290 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 TFEBP19484 476 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ADRA1BP35368 520 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 PSMD8P48556 350 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 CNTN1Q12860 1018 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SLC25A52Q3SY17 297 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GRTP1Q5TC63 336 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SYPL2Q5VXT5 272 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 SELENOMQ8WWX9 145 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 LENG8Q96PV6 779 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GRIP2Q9C0E4 1043 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 GID8Q9NWU2 228 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 FZD10Q9ULW2 581 aa8.27□□□□□ -1.09
PTPDC1-204ENST00000620992 POLR2AP24928 1970 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 SLC9A3R1O14745 358 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 UBDO15205 165 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KDM1AO60341 852 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 TRIM13O60858 407 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 KRT6AP02538 564 aa8.26□□□□□ -1.09
PTPDC1-204ENST00000620992 DNTTP04053 509 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms