RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TRMT10BQ6PF06 316 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CEP76Q8TAP6 659 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 TMED9Q9BVK6 235 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF350Q9GZX5 532 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 NMRK2Q9NPI5 230 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 AQP9O43315 295 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ORC5O43913 435 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 METTL18O95568 372 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SLC7A1P30825 629 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PGDP52209 483 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ARF3P61204 181 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ARF1P84077 181 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 AP3B2Q13367 1082 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ABHD11Q8NFV4 315 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 STON2Q8WXE9 905 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 EFHD2Q96C19 240 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 MMTAG2Q9BU76 263 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 MAGEB5Q9BZ81 275 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 RNF32Q9H0A6 362 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZBTB20Q9HC78 741 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PRDM8Q9NQV8 689 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 F8W810 466 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 DENRO43583 198 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 AKAP5P24588 427 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 POU6F2P78424 691 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CLVS2Q5SYC1 327 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF557Q8N988 423 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PMM1Q92871 262 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PHOX2BQ99453 314 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ACSS3Q9H6R3 686 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 FBRSQ9HAH7 460 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF302Q9NR11 478 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 TRPM1Q7Z4N2 1603 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ANKRD33BA6NCL7 494 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 MID1O15344 667 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ANGPTL1O95841 491 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GZMAP12544 262 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SPIBQ01892 262 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SHROOM1Q2M3G4 852 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 DPY30Q9C005 99 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SNX15Q9NRS6 342 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GMPR2Q9P2T1 348 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ERGIC3Q9Y282 383 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 FAM95CA0A1B0GW59 222 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 TRUB2O95900 331 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CFHP08603 1231 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 WARSP23381 471 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SCN1BQ07699 218 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GALNT1Q10472 559 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GRM3Q14832 879 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 RNF151Q2KHN1 245 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 HAGHLQ6PII5 290 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 RDH11Q8TC12 318 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 FAM20AQ96MK3 541 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 UQCC2Q9BRT2 126 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 POLE3Q9NRF9 147 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF490Q9ULM2 529 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 A0A1B0GTW7 788 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 OIP5O43482 229 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 OAS1P00973 400 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 NPR3P17342 541 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 FLYWCH1Q4VC44 716 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZZZ3Q8IYH5 903 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GLB1L3Q8NCI6 653 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PTERQ96BW5 349 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SLC30A2Q9BRI3 323 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 IGSF1Q8N6C5 1336 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF879B4DU55 563 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 RPS17P08708 135 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ATXN7L3Q14CW9 347 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PLEKHG4Q58EX7 1191 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CELF3Q5SZQ8 465 aaKnown RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 OTOP2Q7RTS6 562 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 LDHDQ86WU2 507 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF280BQ86YH2 543 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PLCZ1Q86YW0 608 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 HM13Q8TCT9 377 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 NAT9Q9BTE0 207 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 ASTN1O14525 1302 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CHADO15335 359 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PLA2G6O60733 806 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CDRT1O95170 752 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 OR5F1O95221 314 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 THEGLP0DJG4 465 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 IL7P13232 177 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 GGT5P36269 586 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SLC10A7Q0GE19 358 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CERCAMQ5T4B2 595 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 NDUFAF5Q5TEU4 345 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 RANGRFQ9HD47 186 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-214ENST00000620676 CISHQ9NSE2 258 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 POFUT2Q9Y2G5 429 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 PCDHGA11Q9Y5H2 935 aa5.03□□□□□ -1.6
VPS13D-214ENST00000620676 SEPT4O43236 478 aa5.03□□□□□ -1.61
VPS13D-214ENST00000620676 APOA4P06727 396 aa5.03□□□□□ -1.61
VPS13D-214ENST00000620676 HNRNPH3P31942 346 aaKnown RBP5.03□□□□□ -1.61
VPS13D-214ENST00000620676 SPAM1P38567 509 aa5.03□□□□□ -1.61
VPS13D-214ENST00000620676 HNMTP50135 292 aa5.03□□□□□ -1.61
VPS13D-214ENST00000620676 ANGEL2Q5VTE6 544 aaKnown RBP5.03□□□□□ -1.61
VPS13D-214ENST00000620676 LIPMQ5VYY2 423 aa5.03□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms