RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MAP1SQ66K74 1059 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 SDE2Q6IQ49 451 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 PIWIL4Q7Z3Z4 852 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 P2RY8Q86VZ1 359 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 GALNT12Q8IXK2 581 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 PACRGLQ8N7B6 248 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 OR10Q1Q8NGQ4 319 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 OR6P1Q8NGX9 317 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 HEXDCQ8WVB3 486 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 TMBIM1Q969X1 311 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 TBCDQ9BTW9 1192 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 UBIAD1Q9Y5Z9 338 aa9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 DDX60LQ5H9U9 1706 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-210ENST00000620204 A0A087WZ62 844 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TRIM24O15164 1050 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 DYRK3O43781 588 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TSPAN9O75954 239 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GJB1P08034 283 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 HGFP14210 728 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZNF37AP17032 561 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 CCT8P50990 548 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 KCNK10P57789 538 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TAS2R39P59534 338 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 LAPTM4AQ15012 233 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 LRIT3Q3SXY7 679 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ANKRD34AQ69YU3 496 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZNF470Q6ECI4 717 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PMF1Q6P1K2 205 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GPC2Q8N158 579 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MIER2Q8N344 545 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 DCBLD1Q8N8Z6 715 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 CNIH3Q8TBE1 160 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MCOLN3Q8TDD5 553 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 BIRC7Q96CA5 298 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PPM1MQ96MI6 270 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MRPL4Q9BYD3 311 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ALG9Q9H6U8 611 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 RASSF1Q9NS23 344 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 CITO14578 2027 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 KRT87PA6NCN2 255 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MYO1GB0I1T2 1018 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 FZD9O00144 591 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TEX28O15482 410 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 SOAT2O75908 522 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PRKCBP05771 671 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 HSMCR30P0CW71 290 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GPD2P43304 727 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ASPAP45381 313 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 LEPRP48357 1165 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GSK3BP49841 420 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ST13P50502 369 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 DEFA1P59665 94 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 DEFA3P59666 94 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZBTB8OSQ8IWT0 167 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ITFG1Q8TB96 612 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ROGDIQ9GZN7 287 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 HOXD1Q9GZZ0 328 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MID1IP1Q9NPA3 183 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 AASDHPPTQ9NRN7 309 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 C14orf119Q9NWQ9 140 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 FEM1BQ9UK73 627 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ADAM28Q9UKQ2 775 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZNF99A8MXY4 864 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 OGTO15294 1046 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PMPCBO75439 489 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 RECQL5O94762 991 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 LYPLA2O95372 231 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GFAPP14136 432 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MTHFRP42898 656 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ALDH7A1P49419 539 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ARSFP54793 590 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 YBX1P67809 324 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 GTF2H3Q13889 308 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ATP6AP1Q15904 470 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 FKBP9P1Q75LS8 142 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 FAM160B2Q86V87 743 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TBC1D21Q8IYX1 336 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 CELF2-AS1Q8N7Q2 184 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 PNPT1Q8TCS8 783 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 UBASH3BQ8TF42 649 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TOP1MTQ969P6 601 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 MCRS1Q96EZ8 462 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TUBA1CQ9BQE3 449 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 RIBC2Q9H4K1 309 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 AMBNQ9NP70 447 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZNF302Q9NR11 478 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 RNF146Q9NTX7 359 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 LIMD1Q9UGP4 676 aa9.76□□□□□ -0.85
TNFAIP3-210ENST00000620204 AQP12BA6NM10 295 aa9.75□□□□□ -0.85
TNFAIP3-210ENST00000620204 FAM155AB1AL88 458 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-210ENST00000620204 TMCC2O75069 709 aa9.75□□□□□ -0.85
TNFAIP3-210ENST00000620204 SEC14L2O76054 403 aa9.75□□□□□ -0.85
TNFAIP3-210ENST00000620204 AHSGP02765 367 aa9.75□□□□□ -0.85
TNFAIP3-210ENST00000620204 EDN1P05305 212 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms