RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CCDC185Q8N715 623 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MFSD3Q96ES6 412 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 FSD1LQ9BXM9 530 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PCDHAC1Q9H158 963 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MRPL46Q9H2W6 279 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 POMKQ9H5K3 350 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TBCCD1Q9NVR7 557 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RCOR3Q9P2K3 495 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 COPG1Q9Y678 874 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TRIM43BA6NCK2 446 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 OR6C75A6NL08 312 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 NCAM2O15394 837 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ZSCAN9O15535 394 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 DAB1O75553 588 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TIPRLO75663 272 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SOAT2O75908 522 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 C1QAP02745 245 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CASP2P42575 452 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC5A3P53794 718 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 DEFB103AP81534 67 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC10A2Q12908 348 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 NAPRTQ6XQN6 538 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SPATC1Q76KD6 591 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF354CQ86Y25 554 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SIX5Q8N196 739 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 PYROXD2Q8N2H3 581 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SMYD1Q8NB12 490 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 EXT2Q93063 718 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TRIM43Q96BQ3 446 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 OMDQ99983 421 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 USB1Q9BQ65 265 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM175Q9BSA9 504 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 C9orf16Q9BUW7 83 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RHOJQ9H4E5 214 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 UTP6Q9NYH9 597 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SUCOQ9UBS9 1254 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 VPS28Q9UK41 221 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MKI67P46013 3256 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MT-CO1P00395 513 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 EN2P19622 333 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC7A1P30825 629 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RFC2P35250 354 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 GPR15P49685 360 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CDH15P55291 814 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MS4A2Q01362 244 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RHDQ02161 417 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SULT2A1Q06520 285 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 DUSP4Q13115 394 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RFTN1Q14699 578 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 GRM3Q14832 879 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 USP41Q3LFD5 358 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 AGAP9Q5VTM2 703 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ALG1LQ6GMV1 187 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 STRADAQ7RTN6 431 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 TAS1R1Q7RTX1 841 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 IFNEQ86WN2 208 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC41A1Q8IVJ1 513 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 USP33Q8TEY7 942 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF558Q96NG5 402 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 BIRC8Q96P09 236 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MAGEB5Q9BZ81 275 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 SIK2Q9H0K1 926 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 MARCH5Q9NX47 278 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 IPO11Q9UI26 975 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 LHX6Q9UPM6 363 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CEPT1Q9Y6K0 416 aa6.99□□□□□ -1.29
SRGAP3-213ENST00000618999 CLASP2O75122 1294 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 AP2A1O95782 977 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 F7P08709 466 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ITGB8P26012 769 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 OR1D2P34982 312 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ENTPD1P49961 510 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC7A2P52569 658 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 NME5P56597 212 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CSHL1Q14406 222 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 NEDD8Q15843 81 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TRIM16LQ309B1 348 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 CERCAMQ5T4B2 595 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 C1orf53Q5VUE5 145 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 GPR107Q5VW38 600 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 RWDD4Q6NW29 188 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ZBTB8BQ8NAP8 495 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 IPMKQ8NFU5 416 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TOP1MTQ969P6 601 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 COX4I2Q96KJ9 171 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 WDCPQ9H6R7 721 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 POLR1BQ9H9Y6 1135 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 IGSF9Q9P2J2 1179 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 ZDHHC2Q9UIJ5 367 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FOXD3Q9UJU5 478 aaPredicted RBP6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TRHDEQ9UKU6 1024 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 TBC1D30Q9Y2I9 924 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 PRSS51A0A1B0GVH4 220 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 H0YJX3 145 aa6.98□□□□□ -1.29
SRGAP3-213ENST00000618999 NR5A2O00482 541 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms