RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NBEAQ8NFP9 2946 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 BPTFQ12830 3046 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3DA0A087WVF3 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3IA0A087WXS9 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3EA0A087X179 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3KA0A087X1G2 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3FA6NER0 549 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NEMP2A6NFY4 417 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 HACD1B0YJ81 288 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PATE3B3GLJ2 98 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3LB9A6J9 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 E7EVH7 732 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PPP1R12AO14974 1030 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RAD51BO15315 384 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RGS16O15492 202 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 LIASO43766 372 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FZD6O60353 706 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SOCS5O75159 536 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TJP3O95049 919 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PGLSO95336 258 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 GAS8O95995 478 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 MT-CYBP00156 380 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CFIP05156 583 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PYGLP06737 847 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FAM153BP0C7A2 387 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3HP0C7X1 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ADRB3P13945 408 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NFKB1P19838 968 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 HNRNPA2B1P22626 353 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CA4P22748 312 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ECHS1P30084 290 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 AKT2P31751 481 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CD86P42081 329 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 KCNJ1P48048 391 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 AP1S1P61966 158 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 BNC1Q01954 994 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF844Q08AG5 666 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 XRCC4Q13426 336 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RIPK1Q13546 671 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SNX1Q13596 522 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PTK2BQ14289 1009 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 STAT4Q14765 748 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SF3A2Q15428 464 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FAM153CQ494X1 144 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TMEM259Q4ZIN3 620 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TNFAIP8L3Q5GJ75 292 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SPDYAQ5MJ70 313 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3GQ6DHY5 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3CQ6IPX1 549 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TCEAL6Q6IPX3 200 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NAPEPLDQ6IQ20 393 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TIGD7Q6NT04 549 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TTC27Q6P3X3 843 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FBXL19Q6PCT2 694 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 DRICH1Q6PGQ1 229 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ARHGEF18Q6ZSZ5 1173 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RFLNAQ6ZTI6 216 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NLRP8Q86W28 1048 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 KLHDC8BQ8IXV7 354 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TBC1D3Q8IZP1 549 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NDUFAF2Q8N183 169 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PELI3Q8N2H9 469 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CBARPQ8N350 705 aaPredicted RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 MINDY1Q8N5J2 469 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CCDC89Q8N998 374 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FAM71DQ8N9W8 422 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ATL2Q8NHH9 583 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CCDC110Q8TBZ0 833 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 GANCQ8TET4 914 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 BTN2A2Q8WVV5 523 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PIH1D2Q8WWB5 315 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 HTR3CQ8WXA8 447 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 KLK6Q92876 244 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ART4Q93070 314 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TCEAL3Q969E4 200 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 MAGOHBQ96A72 148 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 BIRC7Q96CA5 298 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RTP4Q96DX8 246 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 IMP4Q96G21 291 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ANKRD27Q96NW4 1050 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RBM15Q96T37 977 aaKnown RBP eCLIP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TUBB6Q9BUF5 446 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 DUSP23Q9BVJ7 150 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 POLR1EQ9GZS1 481 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SLC25A51Q9H1U9 297 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ATP13A3Q9H7F0 1226 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 TM9SF3Q9HD45 589 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 PCDH12Q9NPG4 1184 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SCUBE2Q9NQ36 999 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FSCN3Q9NQT6 498 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 RXFP3Q9NSD7 469 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 ZDHHC18Q9NUE0 388 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 UBP1Q9NZI7 540 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SENP1Q9P0U3 644 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 SAMD15Q9P1V8 674 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 FAM153AQ9UHL3 310 aa5.26□□□□□ -1.57
SHMT1-211ENST00000618902 NOVA2Q9UNW9 492 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 APOBEC2Q9Y235 224 aaKnown RBP5.26□□□□□ -1.57
SHMT1-211ENST00000618902 CHKBQ9Y259 395 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms