RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 LRRC74BQ6ZQY2 392 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
SRRT-216ENST00000618262 ANKS1BQ7Z6G8 1248 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 CCDC36Q8IYA8 594 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 MMGT1Q8N4V1 131 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 KCTD4Q8WVF5 259 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 KCTD13Q8WZ19 329 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 ALG3Q92685 438 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 OMA1Q96E52 524 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PLK2Q9NYY3 685 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 STMN3Q9NZ72 180 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
SRRT-216ENST00000618262 PLXNA3P51805 1871 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 ZNF840PA6NDX5 716 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 TRMUO75648 421 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 CCNB1P14635 433 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 PRKCAP17252 672 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 CCNA2P20248 432 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 RPP30P78346 268 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 DUSP6Q16828 381 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 FAM13CQ8NE31 585 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 PSMG2Q969U7 264 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 UTP4Q969X6 686 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 ZNF317Q96PQ6 595 aaPredicted RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 NSUN3Q9H649 340 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 ARHGAP26Q9UNA1 814 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 USP3Q9Y6I4 520 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 A0A0G2JPF8 293 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 HNRNPCL3B7ZW38 293 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 TSPAN6O43657 245 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 NDUFS6O75380 124 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 USP1O94782 785 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 MT-ND3P03897 115 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 HNRNPCL4P0DMR1 293 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 HDCP19113 662 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 VIPR2P41587 438 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 MATKP42679 507 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 MAGEA11P43364 429 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 CDC20Q12834 499 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 CCDC149Q6ZUS6 474 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 CIR1Q86X95 450 aaPredicted RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 ZFYVE19Q96K21 471 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
SRRT-216ENST00000618262 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 APOBEC2Q9Y235 224 aaKnown RBP12.08□□□□□ -0.48
SRRT-216ENST00000618262 UBXN8O00124 270 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CCRL2O00421 344 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 PJA2O43164 708 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 TSPAN3O60637 253 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 HMGN1P05114 100 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CSH1P0DML2 217 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CSH2P0DML3 217 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 MBL2P11226 248 aaPredicted RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 VCLP18206 1134 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 SCRN3Q0VDG4 424 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 GEN1Q17RS7 908 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 OTUD1Q5VV17 481 aaPredicted RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 RANBP10Q6VN20 620 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 SLC26A9Q7LBE3 791 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CFAP52Q8N1V2 620 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 ADAM7Q9H2U9 754 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 DHX35Q9H5Z1 703 aaKnown RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 C10orf88Q9H8K7 445 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.07□□□□□ -0.48
SRRT-216ENST00000618262 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 MAGEB16A2A368 324 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 FAM72CH0Y354 149 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 POLR1CO15160 346 aaPredicted RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 NDUFA2O43678 99 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CLN5O75503 358 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 FOSL2P15408 326 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CEBPBP17676 345 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 HK2P52789 917 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CYP4F2P78329 520 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 CYP4F3Q08477 520 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 VAC14Q08AM6 782 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 FAM72AQ5TYM5 149 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 FAM72DQ6L9T8 149 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 MON1AQ86VX9 555 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 FAM72BQ86X60 149 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 LRRC57Q8N9N7 239 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 PIK3C3Q8NEB9 887 aa12.07□□□□□ -0.48
SRRT-216ENST00000618262 ZNF707Q96C28 371 aaPredicted RBP12.07□□□□□ -0.48
SRRT-216ENST00000618262 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms