RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NAF1Q96HR8 494 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZNF599Q96NL3 588 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 TNKS2Q9H2K2 1166 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 VPS51Q9UID3 782 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 IKZF3Q9UKT9 509 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 COPG1Q9Y678 874 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 A0A1W2PRU2 124 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SUPT3HB4E1H0 165 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SDHDO14521 159 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SUPT3HO75486 399 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 EPOP01588 193 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 CD1DP15813 335 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 CR2P20023 1033 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 PPARGP37231 505 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 PRMT2P55345 433 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 ACTR3P61158 418 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 CYLC2Q14093 348 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZRSR2Q15696 482 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 C5orf22Q49AR2 442 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 NET1Q7Z628 596 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 FAM156AQ8NDB6 213 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 PAWRQ96IZ0 340 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 SLC45A3Q96JT2 553 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 FEM1AQ9BSK4 669 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 BEGAINQ9BUH8 593 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SPG21Q9NZD8 308 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 EVLQ9UI08 416 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 CDC7O00311 574 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 NVLO15381 856 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 GPC4O75487 556 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 CHRM3P20309 590 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 FDXRP22570 491 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 ARL1P40616 181 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ZNF140P52738 457 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 ECT2LQ008S8 904 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 TSNQ15631 228 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 TRMT5Q32P41 509 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 TLDC1Q6P9B6 456 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 LAYNQ6UX15 382 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 GAREM2Q75VX8 874 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SETD3Q86TU7 594 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 LCA5Q86VQ0 697 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
CIITA-212ENST00000618207 SIDT2Q8NBJ9 832 aaKnown RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 DNAJC9Q8WXX5 260 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 MYRFLQ96LU7 910 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 ABCG8Q9H221 673 aa12.38□□□□□ -0.43
CIITA-212ENST00000618207 SEMA4BQ9NPR2 832 aaPredicted RBP12.38□□□□□ -0.43
CIITA-212ENST00000618207 A0A1B0GTL3 188 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 NPHS1O60500 1241 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 EFEMP2O95967 443 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 LPOP22079 712 aaPredicted RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 MAGEA8P43361 318 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 FOXA1P55317 472 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 KLHDC10Q6PID8 442 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 HERC6Q8IVU3 1022 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 ADAMTS19Q8TE59 1207 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TRPC4APQ8TEL6 797 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 GPR63Q9BZJ6 419 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 MID1IP1Q9NPA3 183 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 NLE1Q9NVX2 485 aaPredicted RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 TBX21Q9UL17 535 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 POMPQ9Y244 141 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TBC1D30Q9Y2I9 924 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 PIKFYVEQ9Y2I7 2098 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 RGSL1A5PLK6 1076 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 BTN3A1O00481 513 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 SMIM24O75264 130 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 F11P03951 625 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 THRAP10827 490 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 ANPEPP15144 967 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 VHLP40337 213 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 ACVR1Q04771 509 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 TAF1AQ15573 450 aaPredicted RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 ZNF678Q5SXM1 525 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 METTL21CQ5VZV1 264 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 LYSMD3Q7Z3D4 306 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 DSELQ8IZU8 1212 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
CIITA-212ENST00000618207 CEP70Q8NHQ1 597 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 SLC22A17Q8WUG5 538 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
CIITA-212ENST00000618207 C3orf30Q96M34 536 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms