RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PSMD3O43242 534 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF821O75541 412 aaPredicted RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ANXA9O76027 345 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 DXOO77932 396 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 PCDH8O95206 1070 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ZSCAN5DPP0CG00 497 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ETS1P14921 441 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 PSMB4P28070 264 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 RPL22P35268 128 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 FDFT1P37268 417 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 CD86P42081 329 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 GEMP55040 296 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 CLDN2P57739 230 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 PARP6Q2NL67 630 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 TMEM259Q4ZIN3 620 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ARSIQ5FYB1 569 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 SEL1L3Q68CR1 1132 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 GDPD4Q6W3E5 623 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 ERN2Q76MJ5 926 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 LSMEM2Q8N112 164 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 FAM181AQ8N9Y4 354 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 FAM174AQ8TBP5 190 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 PDCD6IPQ8WUM4 868 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 NAF1Q96HR8 494 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 PPP1R16AQ96I34 528 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 TUBGCP5Q96RT8 1024 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 RBM15Q96T37 977 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 DUSP23Q9BVJ7 150 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 OSBPL1AQ9BXW6 950 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 HDAC8Q9BY41 377 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 AAR2Q9Y312 384 aaKnown RBP14.89□□□□□ -0.03
UBXN1-218ENST00000616865 U3KQA8 63 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 MGAQ8IWI9 3026 aa14.89□□□□□ -0.03
UBXN1-218ENST00000616865 FAM187AA6NFU0 413 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 NEMP2A6NFY4 417 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 SCAMP1O15126 338 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 TTI1O43156 1089 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 LZTS3O60299 673 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 USP12O75317 370 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 CSO75390 466 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 PMPCBO75439 489 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 LEFTY1O75610 366 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 UGT2B4P06133 528 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 MYF5P13349 255 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 XPAP23025 273 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 GKP32189 559 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 ADCY8P40145 1251 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 UCNP55089 124 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 TMPRSS3P57727 454 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 ERVPABLB-1P60509 514 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 HNRNPKP61978 463 aaKnown RBP eCLIP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 BASP1P80723 227 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 CFHR1Q03591 330 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 GPS1Q13098 491 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 PCSK7Q16549 785 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 KYAT3Q6YP21 454 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 PTAR1Q7Z6K3 402 aaPredicted RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF605Q86T29 641 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 PRUNE1Q86TP1 453 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 JAMLQ86YT9 394 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 SPATA22Q8NHS9 363 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 IMP4Q96G21 291 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 FCRL5Q96RD9 977 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 FSD1LQ9BXM9 530 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 CPEB1Q9BZB8 566 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 EVA1BQ9NVM1 165 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 UBP1Q9NZI7 540 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 WASF2Q9Y6W5 498 aa14.88□□□□□ -0.03
UBXN1-218ENST00000616865 SETXQ7Z333 2677 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 ASH1LQ9NR48 2969 aaKnown RBP14.88□□□□□ -0.03
UBXN1-218ENST00000616865 TRPM6Q9BX84 2022 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 K7ESM1 405 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 PIGNO95427 931 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 CR2P20023 1033 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 CD68P34810 354 aaPredicted RBP14.87□□□□□ -0.03
UBXN1-218ENST00000616865 LSSP48449 732 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 DUSP3P51452 185 aaPredicted RBP14.87□□□□□ -0.03
UBXN1-218ENST00000616865 NEK3P51956 506 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 TERF1P54274 439 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 EPHB1P54762 984 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 PTK6Q13882 451 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF542PQ5EBM4 170 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 FAXCQ5TGI0 409 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 BROXQ5VW32 411 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ALG1LQ6GMV1 187 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 KIAA1161Q6NSJ0 714 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 Q6ZSR6 202 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 DCP2Q8IU60 420 aaKnown RBP14.87□□□□□ -0.03
UBXN1-218ENST00000616865 CAMK1DQ8IU85 385 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 GLIS1Q8NBF1 620 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ZNF548Q8NEK5 533 aaPredicted RBP14.87□□□□□ -0.03
UBXN1-218ENST00000616865 ARRDC2Q8TBH0 407 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 IFI44Q8TCB0 444 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 KCNE4Q8WWG9 221 aa14.87□□□□□ -0.03
UBXN1-218ENST00000616865 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms