RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM8A1Q9UBU6 413 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 SLC23A2Q9UGH3 650 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PTPRQQ9UMZ3 2332 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 OR51F1A6NGY5 319 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 APOC4-APOC2K7ER74 178 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PCDHGA12O60330 932 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 APOC2P02655 101 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 NME1P15531 152 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 VIPR1P32241 457 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 HK3P52790 923 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 THOP1P52888 689 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 MAZP56270 477 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 CRADDP78560 199 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 CDK3Q00526 305 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 MSLNQ13421 630 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 SLC45A4Q5BKX6 768 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ANKRD20A2Q5SQ80 823 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ANKRD20A1Q5TYW2 823 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ANKRD20A3Q5VUR7 823 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 NEK5Q6P3R8 708 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 DARS2Q6PI48 645 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 NAPRTQ6XQN6 538 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 B3GNT8Q7Z7M8 397 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PARGQ86W56 976 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 BEND7Q8N7W2 519 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 OR13C4Q8NGS5 318 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 RAB7BQ96AH8 199 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 AP1M1Q9BXS5 423 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 IL1RAPL1Q9NZN1 696 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 GULP1Q9UBP9 304 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 SUFUQ9UMX1 484 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 DMTF1Q9Y222 760 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PRRC2CQ9Y520 2896 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 TCRBV7S3A2A0A539 114 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 CAPN8A6NHC0 703 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 BTNL10A8MVZ5 291 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 BPIP17213 487 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 CSRP1P21291 193 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 TRIM23P36406 574 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 GNPDA1P46926 289 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ACADVLP49748 655 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 SRP54P61011 504 aaKnown RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PDK1Q15118 436 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PROX2Q3B8N5 592 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 MEI1Q5TIA1 1274 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 DENND5AQ6IQ26 1287 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 KYQ8NBH2 561 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 JPH3Q8WXH2 748 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 AP2M1Q96CW1 435 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 FICDQ9BVA6 458 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 ATXN7L1Q9ULK2 861 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-208ENST00000614678 PHTF1Q9UMS5 762 aa5.68□□□□□ -1.5
CPNE3-208ENST00000614678 AQP9O43315 295 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 IPO7O95373 1038 aaKnown RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 RXRGP48443 463 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 ARRB1P49407 418 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 VPS41P49754 854 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PDX1P52945 283 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 CDK18Q07002 472 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SEPT7Q16181 437 aaKnown RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 NKAIN2Q5VXU1 208 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 TTC27Q6P3X3 843 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 Q8N9G6 341 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 NSMCE1Q8WV22 266 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 CARS2Q9HA77 564 aaKnown RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 RSPH14Q9UHP6 348 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 KCNK6Q9Y257 313 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 HS3ST3A1Q9Y663 406 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PIKFYVEQ9Y2I7 2098 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 B4DGG1 531 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SOCS5O75159 536 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 IFNB1P01574 187 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 HGFP14210 728 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 MX2P20592 715 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 STC1P52823 247 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PPARDQ03181 441 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 ELP6Q0PNE2 266 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 NFATC4Q14934 902 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 E2F5Q15329 346 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 ATP13A5Q4VNC0 1218 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 TIGD7Q6NT04 549 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 FAM151BQ6UXP7 276 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 DET1Q7L5Y6 550 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SLC35F6Q8N357 371 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PDCD7Q8N8D1 485 aaKnown RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SLC25A51Q9H1U9 297 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SCHIP1Q9P0W5 487 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 SLC2A6Q9UGQ3 507 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 DNAJC16Q9Y2G8 782 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PPIL1Q9Y3C6 166 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PRSS38A1L453 326 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 CCDC66A2RUB6 948 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 PPP1R12AO14974 1030 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 FLRT2O43155 660 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 RPL10P27635 214 aaKnown RBP5.67□□□□□ -1.5
CPNE3-208ENST00000614678 GRK6P43250 576 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 GPR1P46091 355 aa5.67□□□□□ -1.5
CPNE3-208ENST00000614678 RABIFP47224 123 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms