RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FMN2Q9NZ56 1722 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 TCRBV9S1A1TA0A576 114 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PMPCBO75439 489 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 AP2A2O94973 939 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CSH1P0DML2 217 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CSH2P0DML3 217 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 PVALBP20472 110 aaPredicted RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 CAPZA1P52907 286 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 MYBPC1Q00872 1141 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CYP24A1Q07973 514 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 STARD3Q14849 445 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 TIGD6Q17RP2 521 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ARSHQ5FYA8 562 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 DPY19L3Q6ZPD9 716 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 OR14K1Q8NGZ2 314 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 C1GALT1C1Q96EU7 318 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SETD4Q9NVD3 440 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZNF639Q9UID6 485 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 TULP4Q9NRJ4 1543 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 CYBBP04839 570 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ANXA5P08758 320 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ADAM8P78325 824 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZSWIM3Q96MP5 696 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SAV1Q9H4B6 383 aaPredicted RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 TIPRLO75663 272 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SRPRAP08240 638 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 ABRQ12979 859 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SNAPC1Q16533 368 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ADGRD2Q7Z7M1 963 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 DCP2Q8IU60 420 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 TMEM199Q8N511 208 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 C10orf82Q8WW14 230 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SEC14L1Q92503 715 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ENTPD6O75354 484 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 COX7A2P14406 83 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SPIBQ01892 262 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 FSTL5Q8N475 847 aaPredicted RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 LSM14AQ8ND56 463 aaKnown RBP8.76□□□□□ -1.01
TTC28-208ENST00000612946 PHC3Q8NDX5 983 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 FBXO30Q8TB52 745 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 SSX3Q99909 188 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 FN3KQ9H479 309 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 RHOJQ9H4E5 214 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 ZNF358Q9NW07 568 aa8.76□□□□□ -1.01
TTC28-208ENST00000612946 AURKAO14965 403 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 CYP7B1O75881 506 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 SLC16A2P36021 539 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 RPL4P36578 427 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 CENPAP49450 140 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 AIF1P55008 147 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 AP1S1P61966 158 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NDUFA9Q16795 377 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 PLEKHN1Q494U1 663 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZCCHC12Q6PEW1 402 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 MCCC1Q96RQ3 725 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 POLR3HQ9Y535 204 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 NWD1Q149M9 1564 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 NPHS1O60500 1241 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 PRH1P02810 166 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF7P17097 686 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 CES1P23141 567 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF543Q08ER8 600 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 TRIM28Q13263 835 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 RAB12Q6IQ22 244 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 USP17L6PQ6QN14 398 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 FAM198BQ6UWH4 519 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 COLGALT1Q8NBJ5 622 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 OR5K1Q8NHB7 308 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 CSGALNACT1Q8TDX6 532 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 SERPINB11Q96P15 392 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 CIB1Q99828 191 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 COPS4Q9BT78 406 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ITPAQ9BY32 194 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 RTFDC1Q9BY42 306 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 COA1Q9GZY4 146 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 DISC1C4P0D8 188 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 F5H423 210 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 PRODHO43272 600 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 BCAS2O75934 225 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
TTC28-208ENST00000612946 HMGCRP04035 888 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 TTPAP49638 278 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 OSTNP61366 133 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ACSM2AQ08AH3 577 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ACSM2BQ68CK6 577 aa8.75□□□□□ -1.01
TTC28-208ENST00000612946 ZNF613Q6PF04 617 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms