RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CD101Q93033 1021 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NCLNQ969V3 563 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 MFSD3Q96ES6 412 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 RMND5BQ96G75 393 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CCDC138Q96M89 665 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SPATA13Q96N96 652 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CCDC90BQ9GZT6 254 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CAB39LQ9H9S4 337 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NCKAP1Q9Y2A7 1128 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SLC25A14O95258 325 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 FOSL2P15408 326 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 STMN1P16949 149 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 TYMPP19971 482 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PBX2P40425 430 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SERPINH1P50454 418 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GDF10P55107 478 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 LRRC74AQ0VAA2 488 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ARMC6Q6NXE6 501 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PACS1Q6VY07 963 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 BBS12Q6ZW61 710 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CMC1Q7Z7K0 106 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 OR4K2Q8NGD2 314 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 FNDC8Q8TC99 324 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 MTFMTQ96DP5 389 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PTCD3Q96EY7 689 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 TBL1YQ9BQ87 522 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 MRPS26Q9BYN8 205 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SLC39A8Q9C0K1 460 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SPASTQ9UBP0 616 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PSMD13Q9UNM6 376 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 A0A0D9SEW6 157 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 SAC3D1A6NKF1 404 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 TRAFD1O14545 582 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 FFAR2O15552 330 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 DNTTP04053 509 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 BMPR1AP36894 532 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CSKP41240 450 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 STK19P49842 368 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PRKG2Q13237 762 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ANKDD1AQ495B1 522 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 LZTR1Q8N653 840 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ALLCQ8N6M5 410 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 LINC00597Q9H2U6 94 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ZMYM5Q9UJ78 669 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 POMPQ9Y244 141 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NUMBLQ9Y6R0 609 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 VPS26AO75436 327 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
FAM3A-221ENST00000612856 OCA2Q04671 838 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 SLC10A7Q0GE19 358 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 ABRQ12979 859 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CMPK2Q5EBM0 449 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 BHLHE22Q8NFJ8 381 aaPredicted RBP10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CCDC28BQ9BUN5 200 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 PIF1Q9H611 641 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 KCNK4Q9NYG8 393 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 NDOR1Q9UHB4 597 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 VPS51Q9UID3 782 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 GPC6Q9Y625 555 aaPredicted RBP10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FAM72CH0Y354 149 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 NCAM2O15394 837 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CCNT2O60583 730 aaKnown RBP10.83□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF623O75123 536 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 ELFN1P0C7U0 828 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 IRS1P35568 1242 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CDK18Q07002 472 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 PTPRCAPQ14761 206 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FAM72AQ5TYM5 149 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FAM72DQ6L9T8 149 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 PRR23BQ6ZRT6 265 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FAM72BQ86X60 149 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CROCCP3Q8IVE0 287 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CRYBG2Q8N1P7 616 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 CALML6Q8TD86 181 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 SLC35F5Q8WV83 523 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 JADE3Q92613 823 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 AZIN2Q96A70 460 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 ESAMQ96AP7 390 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 TMEM159Q96B96 161 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 TCEAL4Q96EI5 215 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 APOPT1Q96IL0 206 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 MAGED4Q96JG8 741 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 KLHL32Q96NJ5 620 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 OSBPL2Q9H1P3 480 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 ATP13A3Q9H7F0 1226 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 BAG5Q9UL15 447 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 A0A1W2PQ67 120 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 OR51F1A6NGY5 319 aa10.83□□□□□ -0.68
FAM3A-221ENST00000612856 MATN2O00339 956 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms