RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 GNLYP22749 145 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 VIPR1P32241 457 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 ETV3P41162 512 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 MAPK9P45984 424 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 NSFP46459 744 aaKnown RBP17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 AIF1P55008 147 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 FMO1Q01740 532 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 WDR59Q6PJI9 974 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 WDR74Q6RFH5 385 aaPredicted RBP17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 TRIM72Q6ZMU5 477 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 ARHGAP22Q7Z5H3 698 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 TUBGCP2Q9BSJ2 902 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 STK33Q9BYT3 514 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 SLC39A8Q9C0K1 460 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 ADAM22Q9P0K1 906 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 KLHL3Q9UH77 587 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 DACH1Q9UI36 760 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 POLHQ9Y253 713 aa17.13■□□□□ 0.33
CSNK1E-215ENST00000612795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 TTLL8A6PVC2 850 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 RFPL1O75677 317 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 CPP00450 1065 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 CYP2A6P11509 494 aaPredicted RBP17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 DESP17661 470 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 HTR7P34969 479 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 DLSTP36957 453 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 GPR1P46091 355 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 HHEXQ03014 270 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 MAP7Q14244 749 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 ERV3-1Q14264 604 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 MIIPQ5JXC2 388 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 MARK2Q7KZI7 788 aaKnown RBP17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 HSD11B1LQ7Z5J1 315 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 GALNT11Q8NCW6 608 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 C3orf20Q8ND61 904 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 NCSTNQ92542 709 aa17.12■□□□□ 0.33
CSNK1E-215ENST00000612795 SHANK1Q9Y566 2161 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 A0A1W2PQ67 120 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 DFFAO00273 331 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 CHRNB2P17787 502 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 TEAD1P28347 426 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 RENBPP51606 427 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 GSCP56915 257 aaPredicted RBP17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 NFATC2Q13469 925 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 GALNT13Q8IUC8 556 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 SFRP1Q8N474 314 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 FNIP1Q8TF40 1166 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 MCEEQ96PE7 176 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 ULBP3Q9BZM4 244 aa17.11■□□□□ 0.33
CSNK1E-215ENST00000612795 A1L4Q6 167 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 PSMD11O00231 422 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 EEF2KO00418 725 aaKnown RBP17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 INPP4BO15327 924 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 DAPK3O43293 454 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 SOCS5O75159 536 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 CALB1P05937 261 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 LHCGRP22888 699 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 F8A1P23610 371 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 FOXM1Q08050 763 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 PTP4A2Q12974 167 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 ZNF235Q14590 738 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 DNAJC24Q6P3W2 148 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 Q6ZVL8 140 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 LZTR1Q8N653 840 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 CPT1CQ8TCG5 803 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 RNF31Q96EP0 1072 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 GPATCH2LQ9NWQ4 482 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 KIAA1468Q9P260 1216 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 CROTQ9UKG9 612 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 AP4E1Q9UPM8 1137 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 TMEM98Q9Y2Y6 226 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 PCDHGC4Q9Y5F7 938 aa17.1■□□□□ 0.33
CSNK1E-215ENST00000612795 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 CDC14CA4D256 554 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 SIGLEC16A6NMB1 481 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 KATNA1O75449 491 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 UNGP13051 313 aaPredicted RBP17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 PMS2P54278 862 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 IL10RBQ08334 325 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 LRP8Q14114 963 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 LBRQ14739 615 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 PYCR3Q53H96 274 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 SH3KBP1Q96B97 665 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 NSMCE3Q96MG7 304 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 PSKH2Q96QS6 385 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 CNPY3Q9BT09 278 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 CD84Q9UIB8 345 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 OAS3Q9Y6K5 1087 aaKnown RBP17.09■□□□□ 0.33
CSNK1E-215ENST00000612795 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms