RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PNPLA1Q8N8W4 532 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 ZMIZ2Q8NF64 920 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 FBXO30Q8TB52 745 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 BRSK1Q8TDC3 778 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 FAM120BQ96EK7 910 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 TMEM169Q96HH4 297 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 SH3GL1Q99961 368 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.67□□□□□ -1.024e-6■■■■■ 37.9
LIG4-204ENST00000611712 ELOVL6Q9H5J4 265 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 RSL24D1Q9UHA3 163 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 TNPO3Q9Y5L0 923 aaKnown RBP8.67□□□□□ -1.02
LIG4-204ENST00000611712 QSER1Q2KHR3 1735 aa8.67□□□□□ -1.02
LIG4-204ENST00000611712 GABRDO14764 452 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 MAFKO60675 156 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 HERVK_113P63132 956 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 PTPRCAPQ14761 206 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ARHGEF6Q15052 776 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 UPP1Q16831 310 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PGS1Q32NB8 556 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PAQR9Q6ZVX9 377 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 STK40Q8N2I9 435 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 CANT1Q8WVQ1 401 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 SEPT8Q92599 483 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 SUSD3Q96L08 255 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 MFSD1Q9H3U5 465 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 AKTIPQ9H8T0 292 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ETAA1Q9NY74 926 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 OPTCQ9UBM4 332 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 NUMBLQ9Y6R0 609 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 OR6C75A6NL08 312 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ZNF682O95780 498 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 CTPS1P17812 591 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 NNMTP40261 264 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 GPR15P49685 360 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 GNA12Q03113 381 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 SULT2A1Q06520 285 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 TRIP4Q15650 581 aaPredicted RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 MSANTD2Q6P1R3 559 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PAQR3Q6TCH7 311 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 CILP2Q8IUL8 1156 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 LINC01465Q8N7H1 131 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 SPPL2BQ8TCT7 592 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 MRGPRX2Q96LB1 330 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PPM1MQ96MI6 270 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PAIP1Q9H074 479 aaKnown RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 ASB8Q9H765 288 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 POLR1BQ9H9Y6 1135 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ZFP14Q9HCL3 533 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 TRMT13Q9NUP7 481 aaKnown RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 PCDHGB4Q9UN71 923 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 H3BMM5 538 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ZNF197O14709 1029 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 HOXA2O43364 376 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 KRT6AP02538 564 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 KRT6BP04259 564 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 DNAJB1P25685 340 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 SLC7A1P30825 629 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ACVRL1P37023 503 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 KRT6CP48668 564 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 PLD1Q13393 1074 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 LRRC8DQ7L1W4 858 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 OR10T2Q8NGX3 314 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 GATA6Q92908 595 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 VPS33AQ96AX1 596 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 ROPN1LQ96C74 230 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 GIMAP2Q9UG22 337 aa8.66□□□□□ -1.02
LIG4-204ENST00000611712 COL11A2P13942 1736 aaPredicted RBP8.66□□□□□ -1.02
LIG4-204ENST00000611712 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 GRID2O43424 1007 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 CDH2P19022 906 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 CPOXP36551 454 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ADARP55265 1226 aaKnown RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 RPL38P63173 70 aaKnown RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 TNK2Q07912 1038 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ALFQ53S48 1182 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 PM20D1Q6GTS8 502 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ABRAXAS1Q6UWZ7 409 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 ALKAL1Q6UXT8 129 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 CCDC81Q6ZN84 652 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 RALGPS2Q86X27 583 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 ELMOD1Q8N336 334 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 MTFMTQ96DP5 389 aaKnown RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 IL12RB2Q99665 862 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 FAM126AQ9BYI3 521 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 PRDM5Q9NQX1 630 aaPredicted RBP8.65□□□□□ -1.02
LIG4-204ENST00000611712 NME7Q9Y5B8 376 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 FADS3Q9Y5Q0 445 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 M0R3G1 203 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 AURKAO14965 403 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 RGS14O43566 566 aa8.65□□□□□ -1.02
LIG4-204ENST00000611712 GLDCP23378 1020 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms