RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 TM6SF2Q9BZW4 377 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 LRRC42Q9Y546 428 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
NEK3-205ENST00000610828 UBFD1O14562 309 aaKnown RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 ACRP10323 421 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 CDH13P55290 713 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 AP2B1P63010 937 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 NFKB2Q00653 900 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 SATB1Q01826 763 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PTPRNQ16849 979 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PFKFB4Q16877 469 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 FAM219BQ5XKK7 198 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 CLEC6AQ6EIG7 209 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PGM2L1Q6PCE3 622 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 Q6ZNB5 142 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PTGR2Q8N8N7 351 aaPredicted RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 TCF12Q99081 682 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 TTC1Q99614 292 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 TRMOQ9BU70 441 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 SYTL2Q9HCH5 934 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PLK2Q9NYY3 685 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 MED16Q9Y2X0 877 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 K7ERQ8 282 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 TGM5O43548 720 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 OR1I1O60431 355 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 SIX3O95343 332 aaPredicted RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 OLFM2O95897 454 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 PENKP01210 267 aaPredicted RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 ARSAP15289 507 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 ADSLP30566 484 aaPredicted RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 UNC50Q53HI1 259 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 TRIM68Q6AZZ1 485 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 GAREM2Q75VX8 874 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 OR6K2Q8NGY2 324 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 RHEBL1Q8TAI7 183 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 RCN3Q96D15 328 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 GPR21Q99679 349 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 MEAF6Q9HAF1 191 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.58□□□□□ -0.24
NEK3-205ENST00000610828 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
NEK3-205ENST00000610828 ANGPTL2Q9UKU9 493 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 TRAF6Q9Y4K3 522 aa13.58□□□□□ -0.24
NEK3-205ENST00000610828 CCDC189A1A4V9 331 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 GFAPP14136 432 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 ANPEPP15144 967 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 GCKP35557 465 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 TTPAP49638 278 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 RAB44Q7Z6P3 723 aaPredicted RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 APCDD1Q8J025 514 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 KYQ8NBH2 561 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 DNAJC9Q8WXX5 260 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 MRPS31Q92665 395 aaKnown RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 BIRC8Q96P09 236 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 ATOH8Q96SQ7 321 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 TFB2MQ9H5Q4 396 aaKnown RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 POMPQ9Y244 141 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 VPS9D1Q9Y2B5 631 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 LRRC14BA6NHZ5 514 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PFDN6O15212 129 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 BAG2O95816 211 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 MTHFD2P13995 350 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 CTPS1P17812 591 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PSMA3P25788 255 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PPM1AP35813 382 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 RAD51Q06609 339 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PPP1R3AQ16821 1122 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 GEN1Q17RS7 908 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 SETMARQ53H47 684 aaPredicted RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 C16orf89Q6UX73 402 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 TPGS1Q6ZTW0 290 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 DSELQ8IZU8 1212 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PELI3Q8N2H9 469 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 SLC26A7Q8TE54 656 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 ALG14Q96F25 216 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 C2orf49Q9BVC5 232 aaPredicted RBP13.57□□□□□ -0.24
NEK3-205ENST00000610828 DERL2Q9GZP9 239 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 GALPQ9UBC7 116 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PACSIN3Q9UKS6 424 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 RNF112Q9ULX5 631 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 OBSL1O75147 1896 aa13.57□□□□□ -0.24
NEK3-205ENST00000610828 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
NEK3-205ENST00000610828 SUPT3HB4E1H0 165 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms