RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 BMPERQ8N8U9 685 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 DTD2Q96FN9 168 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 VPS16Q9H269 839 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 DHX35Q9H5Z1 703 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 PRDM8Q9NQV8 689 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 KLHL3Q9UH77 587 aa17.28■□□□□ 0.36
CHMP4A-211ENST00000609024 SPTAN1Q13813 2472 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 EIF3CLB5ME19 914 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 PSMD11O00231 422 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 TRAFD1O14545 582 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 INPP4BO15327 924 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 SOCS5O75159 536 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 ASMTLO95671 621 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 FUCA1P04066 466 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 KRT7P08729 469 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 UNGP13051 313 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 CHRNB2P17787 502 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 FASLGP48023 281 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 POLR2FP61218 127 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 HHEXQ03014 270 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 LRP8Q14114 963 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 LBRQ14739 615 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 CRTC2Q53ET0 693 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 ASB18Q6ZVZ8 466 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 MARK2Q7KZI7 788 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 PHF13Q86YI8 300 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 CCDC13Q8IYE1 715 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 EIF3CQ99613 913 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 NLRC4Q9NPP4 1024 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 PLEKHB1Q9UF11 243 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 PHTF1Q9UMS5 762 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 AP4E1Q9UPM8 1137 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 TMEM184BQ9Y519 407 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 PCDHGC4Q9Y5F7 938 aa17.27■□□□□ 0.36
CHMP4A-211ENST00000609024 ENO4A6NNW6 628 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 TEAD1P28347 426 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 DLSTP36957 453 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 STAT5AP42229 794 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 CD97P48960 835 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 FOXM1Q08050 763 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PTP4A2Q12974 167 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 NFATC2Q13469 925 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 CLEC16AQ2KHT3 1053 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 ATP1A1-AS1Q5TC04 95 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 Q6ZVL8 140 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 USP45Q70EL2 814 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 TIPARPQ7Z3E1 657 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 HSD11B1LQ7Z5J1 315 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 SLC37A2Q8TED4 501 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PTCD2Q8WV60 388 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PCMTD1Q96MG8 357 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PSKH2Q96QS6 385 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 FAM207AQ9NSI2 230 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 GPATCH2LQ9NWQ4 482 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PDP2Q9P2J9 529 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 POLHQ9Y253 713 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 TMEM98Q9Y2Y6 226 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 PLEKHM1Q9Y4G2 1056 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 KCNMB2Q9Y691 235 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 RPS6KL1Q9Y6S9 549 aa17.26■□□□□ 0.35
CHMP4A-211ENST00000609024 TTLL8A6PVC2 850 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 KATNA1O75449 491 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 PYGLP06737 847 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 SLC2A4P14672 509 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 ERV3-1Q14264 604 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 PPP6R3Q5H9R7 873 aaPredicted RBP17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 TCTN3Q6NUS6 607 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 RFX8Q6ZV50 586 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 ARHGAP22Q7Z5H3 698 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 SLC9B2Q86UD5 537 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 AP2M1Q96CW1 435 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 ULBP3Q9BZM4 244 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 APMAPQ9HDC9 416 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 CNOT8Q9UFF9 292 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 ST14Q9Y5Y6 855 aa17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 UTP20O75691 2785 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-211ENST00000609024 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 RFPL1O75677 317 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 ERCC2P18074 760 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 NR1D1P20393 614 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 RPL7AP62424 266 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 DPTQ07507 201 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 MAP7Q14244 749 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 PYCR3Q53H96 274 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 ERMARDQ5T6L9 678 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 ARMC12Q5T9G4 340 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 ARHGAP36Q6ZRI8 547 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 SFRP1Q8N474 314 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
CHMP4A-211ENST00000609024 ZNF599Q96NL3 588 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms