RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 HP1BP3Q5SSJ5 553 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 CES3Q6UWW8 571 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 KDM7AQ6ZMT4 941 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 CENPUQ71F23 418 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 NLRP9Q7RTR0 991 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 PELI3Q8N2H9 469 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 PLA2G15Q8NCC3 412 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 PTCD2Q8WV60 388 aaKnown RBP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 KIFC1Q9BW19 673 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 ZDHHC18Q9NUE0 388 aa21.55■■□□□ 1.04
NECAB3-221ENST00000607055 NLE1Q9NVX2 485 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 SMG5Q9UPR3 1016 aaKnown RBP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 V9GYY5 206 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-221ENST00000607055 DOCK9Q9BZ29 2069 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 NMBRP28336 390 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 HADHAP40939 763 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 DCDC1P59894 354 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 PDIA2Q13087 525 aaKnown RBP21.54■■□□□ 1.04
NECAB3-221ENST00000607055 CUL1Q13616 776 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 STAT4Q14765 748 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 ZDHHC20Q5W0Z9 365 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 RAET1GQ6H3X3 334 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 ESRP1Q6NXG1 681 aaKnown RBP21.54■■□□□ 1.04
NECAB3-221ENST00000607055 FAM151BQ6UXP7 276 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 GCNT7Q6ZNI0 430 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 TMEM145Q8NBT3 493 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 UBXN4Q92575 508 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 PIGKQ92643 395 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 STAMBPL1Q96FJ0 436 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 PLEKHG4BQ96PX9 1271 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 AGAP2Q99490 1192 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 TRIM56Q9BRZ2 755 aaKnown RBP21.54■■□□□ 1.04
NECAB3-221ENST00000607055 SPATA16Q9BXB7 569 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 CDH19Q9H159 772 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 MRM3Q9HC36 420 aaKnown RBP21.54■■□□□ 1.04
NECAB3-221ENST00000607055 TM9SF3Q9HD45 589 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 IL26Q9NPH9 171 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 NFKBIL1Q9UBC1 381 aaPredicted RBP21.54■■□□□ 1.04
NECAB3-221ENST00000607055 RIMKLBQ9ULI2 386 aa21.54■■□□□ 1.04
NECAB3-221ENST00000607055 GLYATL1P3A0A0U1RQE8 302 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 MAGEB16A2A368 324 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 H0Y8X5 98 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 K7ESM1 405 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 ELK3P41970 407 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 GPR1P46091 355 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 ARSDP51689 593 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 DPTQ07507 201 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 INPP5AQ14642 412 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 HENMT1Q5T8I9 393 aaKnown RBP21.53■■□□□ 1.04
NECAB3-221ENST00000607055 PNCKQ6P2M8 343 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 MICALCLQ6ZW33 695 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 CCDC25Q86WR0 208 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 ANKMY2Q8IV38 441 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 OR13J1Q8NGT2 312 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 EBNA1BP2Q99848 306 aaKnown RBP21.53■■□□□ 1.04
NECAB3-221ENST00000607055 FAM129AQ9BZQ8 928 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 SAYSD1Q9NPB0 183 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 MTRF1LQ9UGC7 380 aaKnown RBP21.53■■□□□ 1.04
NECAB3-221ENST00000607055 CHMP2BQ9UQN3 213 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 HS3ST3A1Q9Y663 406 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 CACNA1HO95180 2353 aa21.53■■□□□ 1.04
NECAB3-221ENST00000607055 SCN8AQ9UQD0 1980 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 PLXNA2O75051 1894 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 FAM237BA0A1B0GVD1 139 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 POM121BA6NF01 834 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 E7ESA3 106 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 TSHRP16473 764 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 RACK1P63244 317 aaKnown RBP21.52■■□□□ 1.04
NECAB3-221ENST00000607055 CHRNA6Q15825 494 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 ARMC3Q5W041 872 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 NLRP8Q86W28 1048 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 SYT12Q8IV01 421 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 IGDCC3Q8IVU1 814 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 TRAM1L1Q8N609 369 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 C1orf216Q8TAB5 229 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 PEX13Q92968 403 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 ZNF669Q96BR6 464 aaPredicted RBP21.52■■□□□ 1.04
NECAB3-221ENST00000607055 LRRC39Q96DD0 335 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 MFSD3Q96ES6 412 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 CDKN2AIPNLQ96HQ2 116 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 BMFQ96LC9 184 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 TBATAQ96M53 351 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 C19orf43Q9BQ61 176 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 FOXP3Q9BZS1 431 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 SUDS3Q9H7L9 328 aaPredicted RBP21.52■■□□□ 1.04
NECAB3-221ENST00000607055 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 TREX1Q9NSU2 369 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 TMEM74BQ9NUR3 256 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 APPL1Q9UKG1 709 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 PILRBQ9UKJ0 227 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 NFU1Q9UMS0 254 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 SPAG17Q6Q759 2223 aa21.52■■□□□ 1.04
NECAB3-221ENST00000607055 A6NNZ2 444 aa21.51■■□□□ 1.03
NECAB3-221ENST00000607055 EIF3HO15372 352 aaKnown RBP eCLIP21.51■■□□□ 1.03
NECAB3-221ENST00000607055 BCAT2O15382 392 aaPredicted RBP21.51■■□□□ 1.03
NECAB3-221ENST00000607055 EPN2O95208 641 aa21.51■■□□□ 1.03
NECAB3-221ENST00000607055 GNSP15586 552 aa21.51■■□□□ 1.03
NECAB3-221ENST00000607055 PGAM1P18669 254 aa21.51■■□□□ 1.03
NECAB3-221ENST00000607055 PSMA3P25788 255 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms