RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MFSD3Q96ES6 412 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 CFAP36Q96G28 342 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 C9orf72Q96LT7 481 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 FCRL3Q96P31 734 aaPredicted RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 AGAP2Q99490 1192 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 KLF6Q99612 283 aaPredicted RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 EBNA1BP2Q99848 306 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 RIOK2Q9BVS4 552 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 KIFC1Q9BW19 673 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 FAM129AQ9BZQ8 928 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 DUSP15Q9H1R2 295 aaPredicted RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 ABCG8Q9H221 673 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 SUDS3Q9H7L9 328 aaPredicted RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 MBNL1Q9NR56 388 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 TREX1Q9NSU2 369 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 PKD2L2Q9NZM6 624 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 IL1RAPL1Q9NZN1 696 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 MTRF1LQ9UGC7 380 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 CA5BQ9Y2D0 317 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 PCDHGA2Q9Y5H1 932 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 ATXN2Q99700 1313 aaKnown RBP7.66□□□□□ -1.18
MSH6-211ENST00000606499 LRP4O75096 1905 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 TRPM6Q9BX84 2022 aa7.66□□□□□ -1.18
MSH6-211ENST00000606499 GLYATL1P3A0A0U1RQE8 302 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ZCWPW2A0A1B0GU75 182 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 FAM237BA0A1B0GVD1 139 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 CCDC162PA2VCL2 907 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 METTL12A8MUP2 240 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 FADS2P1A8MWK0 482 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 H0Y8X5 98 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 EIF3HO15372 352 aaKnown RBP eCLIP7.65□□□□□ -1.18
MSH6-211ENST00000606499 LILRB5O75023 590 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 VAPBO95292 243 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PRAMEF1O95521 474 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 SOD1P00441 154 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PCCBP05166 539 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 POLBP06746 335 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PRSS56P0CW18 603 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PGAM1P18669 254 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 HNRNPA2B1P22626 353 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 MAOBP27338 520 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ARNTP27540 789 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 MC4RP32245 332 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 CA5AP35218 305 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 SPAM1P38567 509 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 MAGEA4P43358 317 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 DHPSP49366 369 aaPredicted RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 CLDN2P57739 230 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 DCDC1P59894 354 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 XIAPP98170 497 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PDE1BQ01064 536 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 CREB5Q02930 508 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ACVR1Q04771 509 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 TCF15Q12870 199 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 CBLBQ13191 982 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PEX6Q13608 980 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LAMB3Q13751 1172 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LRRC14Q15048 493 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 AGERQ15109 404 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LPAL2Q16609 132 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PLK5Q496M5 336 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ANKRD20A4Q4UJ75 823 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 HENMT1Q5T8I9 393 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 WDR93Q6P2C0 686 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 UNC5AQ6ZN44 842 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 GCNT7Q6ZNI0 430 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ZNF765Q7L2R6 523 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LPCAT2Q7L5N7 544 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 NLRP9Q7RTR0 991 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 TMEM135Q86UB9 458 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 NRSN1Q8IZ57 195 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 PNPLA1Q8N8W4 532 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 STYXQ8WUJ0 223 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PTCD2Q8WV60 388 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 HDAC10Q969S8 669 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 AP2M1Q96CW1 435 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 LRRC39Q96DD0 335 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 SERAC1Q96JX3 654 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 TBATAQ96M53 351 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 SLC6A18Q96N87 628 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PLEKHG4BQ96PX9 1271 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 ORAI3Q9BRQ5 295 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PARD6BQ9BYG5 372 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 FOXP3Q9BZS1 431 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PHACTR1Q9C0D0 580 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 MIR1-1HGQ9H1L0 117 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 PCED1AQ9H1Q7 454 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 FAM83DQ9H4H8 585 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 MRM3Q9HC36 420 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 IL26Q9NPH9 171 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 NFKBIL1Q9UBC1 381 aaPredicted RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 ZC3H7BQ9UGR2 993 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 EIF2B4Q9UI10 523 aaKnown RBP7.65□□□□□ -1.18
MSH6-211ENST00000606499 DMXL1Q9Y485 3027 aa7.65□□□□□ -1.18
MSH6-211ENST00000606499 RPS6KL1Q9Y6S9 549 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms