RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 GALEQ14376 348 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TXNRD1Q16881 649 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 KCTD21Q4G0X4 260 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF805Q5CZA5 627 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 FIGNQ5HY92 759 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 WASHC2DQ5SRD0 308 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SCYL2Q6P3W7 929 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 METAP1DQ6UB28 335 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 C5orf46Q6UWT4 87 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 HTR3DQ70Z44 454 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TMCO2Q7Z6W1 182 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 RNF180Q86T96 592 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF589Q86UQ0 364 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ERI1Q8IV48 349 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 NUDCD3Q8IVD9 361 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 NIM1KQ8IY84 436 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 CCDC105Q8IYK2 499 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 HDDC3Q8N4P3 179 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TCP11L2Q8N4U5 519 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SLC25A41Q8N5S1 370 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 METTL25Q8N6Q8 603 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 CELF5Q8N6W0 485 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 PCDH20Q8N6Y1 951 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF366Q8N895 744 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ANKRD52Q8NB46 1076 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 FANCBQ8NB91 859 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SPATA4Q8NEY3 305 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 BBS1Q8NFJ9 593 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF671Q8TAW3 534 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 RASGRP4Q8TDF6 673 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 THAP3Q8WTV1 239 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 DNAJA4Q8WW22 397 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 CPT1BQ92523 772 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 PIGKQ92643 395 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 PRCCQ92733 491 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 COPS5Q92905 334 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 NINJ1Q92982 152 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 YIPF5Q969M3 257 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 MARC2Q969Z3 335 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 NTAN1Q96AB6 310 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZUFSPQ96AP4 578 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TMEM80Q96HE8 168 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF333Q96JL9 665 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 DNAJC1Q96KC8 554 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SERPINB12Q96P63 405 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 INPP4AQ96PE3 977 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TWNKQ96RR1 684 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 CDC6Q99741 560 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 RBM4BQ9BQ04 359 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SYT3Q9BQG1 590 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SEC22CQ9BRL7 303 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 C11orf84Q9BUA3 381 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 EFHD1Q9BUP0 239 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 RBM4Q9BWF3 364 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 BCL2L14Q9BZR8 327 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 PABPC3Q9H361 631 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TDRD3Q9H7E2 651 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 LRRC40Q9H9A6 602 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 EPB41L5Q9HCM4 733 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 KCNH7Q9NS40 1196 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 ZNF275Q9NSD4 429 aaPredicted RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SLC35D1Q9NTN3 355 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 INTS13Q9NVM9 706 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 PLK2Q9NYY3 685 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TBC1D29Q9UFV1 150 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 RUVBL2Q9Y230 463 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SIK3Q9Y2K2 1263 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 MSRB2Q9Y3D2 182 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 TNPO3Q9Y5L0 923 aaKnown RBP5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 SNX14Q9Y5W7 946 aa5.84□□□□□ -1.47
LSM1P2-201ENST00000604911 KDM5BQ9UGL1 1544 aa5.84□□□□□ -1.48
LSM1P2-201ENST00000604911 SPATA31E1Q6ZUB1 1445 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 RIMS2Q9UQ26 1411 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 POLR3AO14802 1390 aaPredicted RBP5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 POLR1AO95602 1720 aaPredicted RBP5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 SPATA31A3Q5VYP0 1347 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 PASKQ96RG2 1323 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 PNMA6EA0A0J9YXQ4 647 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 RNF103-CHMP3A0A140T963 221 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 A0A1W2PPL8 197 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 PQLC2LA1A4F0 135 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 FOXO6A8MYZ6 492 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 H0Y8G0 127 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 SNAP23O00161 211 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 RNF103O00237 685 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 POLRMTO00411 1230 aaKnown RBP5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 CCRL2O00421 344 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 KPNA4O00629 521 aaPredicted RBP5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 TRIM38O00635 465 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 TM9SF1O15321 606 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 AKAP8O43823 692 aaKnown RBP5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 GMDSO60547 372 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 MAGEC1O60732 1142 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 CUTAO60888 179 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 OR7A10O76100 309 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 CCNB2O95067 398 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 LYPLA2O95372 231 aa5.83□□□□□ -1.48
LSM1P2-201ENST00000604911 POMCP01189 267 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms