RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 NDUFS3O75489 264 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LEFTY1O75610 366 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SRP72O76094 671 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KAT7O95251 611 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TGDSO95455 350 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ALPIP09923 528 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GRK2P25098 689 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GDI1P31150 447 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SKIV2L2P42285 1042 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC6A11P48066 632 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SEC24CP53992 1094 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TAS2R39P59534 338 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ASPHQ12797 758 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SMAD4Q13485 552 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ITGA9Q13797 1035 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF234Q14588 700 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GRIN2CQ14957 1233 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CRY1Q16526 586 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FAM83EQ2M2I3 478 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FNDC3BQ53EP0 1204 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 AGAP9Q5VTM2 703 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KLC3Q6P597 504 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CRTC1Q6UUV9 634 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RAPH1Q70E73 1250 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DPPA4Q7L190 304 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TBC1D1Q86TI0 1168 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZSWIM9Q86XI8 627 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CHST14Q8NCH0 376 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF398Q8TD17 642 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CYB5D2Q8WUJ1 264 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF75CPQ92670 426 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KCNJ9Q92806 393 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RAB7BQ96AH8 199 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 EID2BQ96D98 161 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C7orf26Q96N11 449 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KLHL32Q96NJ5 620 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GAS2L1Q99501 681 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KXD1Q9BQD3 176 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 AARSD1Q9BTE6 412 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PLA2G2FQ9BZM2 168 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCDC68Q9H2F9 335 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NMRAL1Q9HBL8 299 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SYTL2Q9HCH5 934 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PKD2L2Q9NZM6 624 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 COPG2Q9UBF2 871 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CDH22Q9UJ99 828 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 EMCNQ9ULC0 261 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 USP15Q9Y4E8 981 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GLYATL1P3A0A0U1RQE8 302 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GAPDHSO14556 408 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PRAMEF1O95521 474 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PYGLP06737 847 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LTA4HP09960 611 aaKnown RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C7P10643 843 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GLULP15104 373 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CTPS1P17812 591 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TMPRSS15P98073 1019 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ELP6Q0PNE2 266 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NFATC2Q13469 925 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ARHGEF7Q14155 803 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GRM2Q14416 872 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SEMA3AQ14563 771 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C9orf64Q5T6V5 341 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 UGT3A1Q6NUS8 523 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ERAP2Q6P179 960 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MICALCLQ6ZW33 695 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC41A1Q8IVJ1 513 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LRRC34Q8IZ02 419 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NRSN1Q8IZ57 195 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CENPLQ8N0S6 344 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RBFAQ8N0V3 343 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ANKS4BQ8N8V4 417 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GPATCH11Q8N954 259 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ARMC2Q8NEN0 867 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCDC126Q96EE4 140 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ATXN7L3BQ96GX2 97 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PAIP2Q9BPZ3 127 aaKnown RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MRPL57Q9BQC6 102 aaKnown RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SIKE1Q9BRV8 207 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C8orf33Q9H7E9 229 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SUDS3Q9H7L9 328 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MLXIPLQ9NP71 852 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KCTD5Q9NXV2 234 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TAS2R13Q9NYV9 303 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KLHL42Q9P2K6 505 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PPM1HQ9ULR3 514 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NUMBLQ9Y6R0 609 aa12.24□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OR51F1A6NGY5 319 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 F8W8V4 182 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PRMT5O14744 637 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms