RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 PDXPQ96GD0 296 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 DEPDC7Q96QD5 511 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 FCRL5Q96RD9 977 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 TRIB3Q96RU7 358 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 DESI2Q9BSY9 194 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 FSD1LQ9BXM9 530 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 FRMD8Q9BZ67 464 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 GPR63Q9BZJ6 419 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 CLPBQ9H078 707 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 TCEAL2Q9H3H9 227 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 FAM83DQ9H4H8 585 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 TRABDQ9H4I3 376 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 CCDC86Q9H6F5 360 aaKnown RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 CARS2Q9HA77 564 aaKnown RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 CYP4F12Q9HCS2 524 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 TRNAU1APQ9NX07 287 aaKnown RBP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC12-209ENST00000604164 HACD3Q9P035 362 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 RSPH14Q9UHP6 348 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 PADI4Q9UM07 663 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 CLCA2Q9UQC9 943 aa11.51□□□□□ -0.57
CCDC12-209ENST00000604164 LRRK1Q38SD2 2015 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 CPED1A4D0V7 1026 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 OPA1O60313 960 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 PMPCBO75439 489 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 TCEA3O75764 348 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 CCDC175P0C221 793 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 HLA-DPA1P20036 260 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 GEMP55040 296 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 DCDC1P59894 354 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ADCY2Q08462 1091 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 WASHC5Q12768 1159 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 GALNT3Q14435 633 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 IHHQ14623 411 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 PDPK2PQ6A1A2 396 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 KDELC2Q7Z4H8 507 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ZNF567Q8N184 647 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 FAM46DQ8NEK8 389 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 SPATA22Q8NHS9 363 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ALG3Q92685 438 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ALS2CR12Q96Q35 445 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ZSCAN5AQ9BUG6 496 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 RIOK2Q9BVS4 552 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 LGR4Q9BXB1 951 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 NRSN2Q9GZP1 204 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 RMI1Q9H9A7 625 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 VPS18Q9P253 973 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 GULP1Q9UBP9 304 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 DKK4Q9UBT3 224 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 CD84Q9UIB8 345 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 PNMA8BQ9ULN7 279 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 SLC17A4Q9Y2C5 497 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 AAR2Q9Y312 384 aaKnown RBP11.5□□□□□ -0.57
CCDC12-209ENST00000604164 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
CCDC12-209ENST00000604164 TDRD6O60522 2096 aaKnown RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 LY6G6EA0A0G2JKS1 128 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 LOC285095A0A1B0GVY8 99 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GPR89AB7ZAQ6 455 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 FTCDO95954 541 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 MT-CYBP00156 380 aaPredicted RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 MT-CO3P00414 261 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 CEACAM5P06731 702 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GPR89BP0CG08 455 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 RBP3P10745 1247 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 PYGMP11217 842 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 NFKB1P19838 968 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 RBL1P28749 1068 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 WNT3AP56704 352 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 TARDBPQ13148 414 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 LRP8Q14114 963 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 PTPRRQ15256 657 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 HENMT1Q5T8I9 393 aaKnown RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GUSBP11Q6P575 273 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 ZNF662Q6ZS27 426 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 B4GALNT4Q76KP1 1039 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 TMC3Q7Z5M5 1100 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 DCBLD1Q8N8Z6 715 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GPBAR1Q8TDU6 330 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SCAMP4Q969E2 229 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 HES6Q96HZ4 224 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 FRMD8P1Q9BZ68 369 aaPredicted RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 TMEM168Q9H0V1 697 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 GBA3Q9H227 469 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 DPEP2Q9H4A9 486 aa11.49□□□□□ -0.57
CCDC12-209ENST00000604164 MRPL40Q9NQ50 206 aaKnown RBP11.49□□□□□ -0.57
CCDC12-209ENST00000604164 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms