RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	SAMSN1	Q9NSI8	373 aa	Known RBP	18.21	■□□□□ 0.51
IRF3-231	ENST00000602190	AP4E1	Q9UPM8	1137 aa		18.21	■□□□□ 0.51
IRF3-231	ENST00000602190	SIK3	Q9Y2K2	1263 aa		18.21	■□□□□ 0.51
IRF3-231	ENST00000602190	PLEKHM1	Q9Y4G2	1056 aa		18.21	■□□□□ 0.51
IRF3-231	ENST00000602190	KCNMB2	Q9Y691	235 aa		18.21	■□□□□ 0.51
IRF3-231	ENST00000602190	SHANK1	Q9Y566	2161 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190		A6NCN8	305 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.2	■□□□□ 0.5
IRF3-231	ENST00000602190		A8MX80	341 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	ERCC2	P18074	760 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	KLK7	P49862	253 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	SCNN1B	P51168	640 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	RENBP	P51606	427 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	MC1R	Q01726	317 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	SLC10A7	Q0GE19	358 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	LRP8	Q14114	963 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	TPD52L1	Q16890	204 aa	Predicted RBP	18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	TMCO4	Q5TGY1	634 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	ADAMTSL4	Q6UY14	1074 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190		Q6ZVL8	140 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	FAM129C	Q86XR2	697 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	PGBD5	Q8N414	524 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	COX14	Q96I36	57 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	MGME1	Q9BQP7	344 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	VPS16	Q9H269	839 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	APMAP	Q9HDC9	416 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	SARS2	Q9NP81	518 aa	Known RBP	18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	TP53TG5	Q9Y2B4	290 aa		18.2	■□□□□ 0.5
IRF3-231	ENST00000602190	RP1L1	Q8IWN7	2480 aa	Predicted RBP	18.2	■□□□□ 0.5
IRF3-231	ENST00000602190		K7EM74	188 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	STK17B	O94768	372 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	EML2	O95834	649 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	ANKRD34C	P0C6C1	535 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	PRKAR1A	P10644	381 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	F8A1	P23610	371 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	HSPA9	P38646	679 aa	Known RBP	18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	HCAR3	P49019	387 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	EPHA4	P54764	986 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	POLR2F	P61218	127 aa	Known RBP	18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	TRAF2	Q12933	501 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	LBR	Q14739	615 aa	Known RBP	18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	HSP90AA4P	Q58FG1	418 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	DNAJC24	Q6P3W2	148 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	RFX8	Q6ZV50	586 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	NUDCD1	Q96RS6	583 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	PEBP4	Q96S96	227 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	SP110	Q9HB58	689 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	GPATCH2L	Q9NWQ4	482 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	PHTF1	Q9UMS5	762 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	KCTD3	Q9Y597	815 aa		18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	MN1	Q10571	1320 aa	Predicted RBP	18.19	■□□□□ 0.5
IRF3-231	ENST00000602190	GOLGA6L3	A6NEY3	463 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	EEF2K	O00418	725 aa	Known RBP	18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	MTSS1	O43312	755 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	CP	P00450	1065 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	MAN1A1	P33908	653 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	DPYS	Q14117	519 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	C4orf17	Q53FE4	359 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	RALGPS1	Q5JS13	557 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	ZNF765	Q7L2R6	523 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	TSPAN33	Q86UF1	283 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	PSTK	Q8IV42	348 aa	Known RBP	18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	TP53INP2	Q8IXH6	220 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	UNC5B	Q8IZJ1	945 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	OR10G6	Q8NH81	332 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	KCTD15	Q96SI1	283 aa	Predicted RBP	18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	SYT11	Q9BT88	431 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	SNRNP25	Q9BV90	132 aa	Known RBP	18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	PCDHGC4	Q9Y5F7	938 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	HIVEP3	Q5T1R4	2406 aa		18.18	■□□□□ 0.5
IRF3-231	ENST00000602190	FZD6	O60353	706 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	DNAJC6	O75061	913 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	RECK	O95980	971 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	CYP2A6	P11509	494 aa	Predicted RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	TNFAIP3	P21580	790 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	ZNF135	P52742	658 aa	Predicted RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	UBE2H	P62256	183 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	DEFB109B	Q30KR1	87 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	ATP1A1-AS1	Q5TC04	95 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	CDKAL1	Q5VV42	579 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	RAET1G	Q6H3X3	334 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	ZNF761	Q86XN6	746 aa	Predicted RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	RAVER1	Q8IY67	606 aa	Known RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	NRSN1	Q8IZ57	195 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	MCOLN2	Q8IZK6	566 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	PIH1D2	Q8WWB5	315 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	CTRC	Q99895	268 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	ABCG8	Q9H221	673 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	SUDS3	Q9H7L9	328 aa	Predicted RBP	18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	NLRC4	Q9NPP4	1024 aa		18.17	■□□□□ 0.5
IRF3-231	ENST00000602190	TTC24	A2A3L6	582 aa	Predicted RBP	18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	PGLS	O95336	258 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	C9	P02748	559 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	TCN2	P20062	427 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	SEPT6	Q14141	434 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	PTPRR	Q15256	657 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	ERMARD	Q5T6L9	678 aa		18.16	■□□□□ 0.5
IRF3-231	ENST00000602190	RFLNA	Q6ZTI6	216 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms