RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 FAM149AA5PLN7 773 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 CLDN7O95471 211 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 CEACAM5P06731 702 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 CETN2P41208 172 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 CDK18Q07002 472 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 GALNT3Q14435 633 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 RFLNAQ6ZTI6 216 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 B4GALNT4Q76KP1 1039 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 RD3Q7Z3Z2 195 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
HERC3-214ENST00000601319 IFI44Q8TCB0 444 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 HAUS1Q96CS2 278 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
HERC3-214ENST00000601319 HERPUD2Q9BSE4 406 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 MAGEE1Q9HCI5 957 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 TRIM10Q9UDY6 481 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 DOLKQ9UPQ8 538 aa17.13■□□□□ 0.33
HERC3-214ENST00000601319 OPA1O60313 960 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 ZNF189O75820 626 aaPredicted RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 NDST3O95803 873 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 IVLP07476 585 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 MYF5P13349 255 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 JUPP14923 745 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 NFKB1P19838 968 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CD68P34810 354 aaPredicted RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 GPR1P46091 355 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 SPINT3P49223 89 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 DCDC1P59894 354 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 HENMT1Q5T8I9 393 aaKnown RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 CCDC181Q5TID7 509 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CDCP2Q5VXM1 449 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 GUSBP11Q6P575 273 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 ZNF567Q8N184 647 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 RNF10Q8N5U6 811 aaKnown RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 UBL4BQ8N7F7 174 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 ACTL9Q8TC94 416 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CCHCR1Q8TD31 782 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 SCAMP4Q969E2 229 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 COX14Q96I36 57 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 FCRL5Q96RD9 977 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 TSGA10Q9BZW7 698 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CDH19Q9H159 772 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CYP4F12Q9HCS2 524 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 MRPL40Q9NQ50 206 aaKnown RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 PKD2L2Q9NZM6 624 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 KLHL8Q9P2G9 620 aaPredicted RBP17.12■□□□□ 0.33
HERC3-214ENST00000601319 CD84Q9UIB8 345 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CLCA2Q9UQC9 943 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 CHD6Q8TD26 2715 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 APC2O95996 2303 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 ACACAQ13085 2346 aa17.12■□□□□ 0.33
HERC3-214ENST00000601319 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 GOLGA6CA6NDK9 693 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 TJP3O95049 919 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 EPOP01588 193 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 GOLGA6DP0CG33 693 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 CLDN6P56747 220 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 PCSK7Q16549 785 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 EFL1Q7Z2Z2 1120 aaKnown RBP17.11■□□□□ 0.33
HERC3-214ENST00000601319 CDKL3Q8IVW4 592 aaPredicted RBP17.11■□□□□ 0.33
HERC3-214ENST00000601319 KYQ8NBH2 561 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 NXPE2Q96DL1 559 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 HIC2Q96JB3 615 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 WDR24Q96S15 920 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 FERMT1Q9BQL6 677 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 RIOK2Q9BVS4 552 aaKnown RBP17.11■□□□□ 0.33
HERC3-214ENST00000601319 TMEM168Q9H0V1 697 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 CCDC86Q9H6F5 360 aaKnown RBP17.11■□□□□ 0.33
HERC3-214ENST00000601319 ZFYVE1Q9HBF4 777 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 RAD18Q9NS91 495 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 GOLGA6AQ9NYA3 693 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 FAM153AQ9UHL3 310 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 ZMIZ1Q9ULJ6 1067 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 GPR34Q9UPC5 381 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 ZNF711Q9Y462 761 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
HERC3-214ENST00000601319 LOC285095A0A1B0GVY8 99 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 PMPCBO75439 489 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 PYGMP11217 842 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
HERC3-214ENST00000601319 TARDBPQ13148 414 aaKnown RBP eCLIP17.1■□□□□ 0.33
HERC3-214ENST00000601319 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
HERC3-214ENST00000601319 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms