RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 RFLNAQ6ZTI6 216 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 C11orf74Q86VG3 221 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 GPR26Q8NDV2 337 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 GSDMBQ8TAX9 411 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 CAVIN3Q969G5 261 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 HDAC10Q969S8 669 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 NUS1Q96E22 293 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 CFAP36Q96G28 342 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 SGSM3Q96HU1 749 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 TBATAQ96M53 351 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 TRIM56Q9BRZ2 755 aaKnown RBP14.31□□□□□ -0.12
UPF1-211ENST00000600868 C1QTNF7Q9BXJ2 289 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 CDC42EP4Q9H3Q1 356 aaKnown RBP14.31□□□□□ -0.12
UPF1-211ENST00000600868 FAM83DQ9H4H8 585 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 C6orf106Q9H6K1 298 aaPredicted RBP14.31□□□□□ -0.12
UPF1-211ENST00000600868 PLAC1Q9HBJ0 212 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 LRRC4CQ9HCJ2 640 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 IL26Q9NPH9 171 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 APPL1Q9UKG1 709 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 INVSQ9Y283 1065 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 COQ6Q9Y2Z9 468 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 CCDC162PA2VCL2 907 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 CCDC151A5D8V7 595 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 GALR2O43603 387 aaPredicted RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 IGHV4-34P06331 123 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 ARNTP27540 789 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 CNR2P34972 360 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 ARCN1P48444 511 aaKnown RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 PMS2P54278 862 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 XIAPP98170 497 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 FGL2Q14314 439 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 ANGPT1Q15389 498 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 KYNUQ16719 465 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 HENMT1Q5T8I9 393 aaKnown RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 C3orf62Q6ZUJ4 267 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 CYS1Q717R9 158 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 TRMT10CQ7L0Y3 403 aaKnown RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
UPF1-211ENST00000600868 GAB3Q8WWW8 586 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 LENG8Q96PV6 779 aaPredicted RBP14.3□□□□□ -0.12
UPF1-211ENST00000600868 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 ZSCAN32Q9NX65 697 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 NINJ2Q9NZG7 142 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 FKBPLQ9UIM3 349 aa14.3□□□□□ -0.12
UPF1-211ENST00000600868 GLYATL1P3A0A0U1RQE8 302 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 METTL12A8MUP2 240 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 CCL22O00626 93 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 GAPDHSO14556 408 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 MAP3K13O43283 966 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 ERLIN1O75477 346 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 VAPBO95292 243 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 PAK4O96013 591 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 SP9P0CG40 484 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 BCKDHBP21953 392 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 SSTR1P30872 391 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 MAT2AP31153 395 aaKnown RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 GPX6P59796 221 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 PRAMEP78395 509 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 RPL6Q02878 288 aaKnown RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 PEX6Q13608 980 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 LRRC14Q15048 493 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 LONRF1Q17RB8 773 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 SETMARQ53H47 684 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 SPDYCQ5MJ68 293 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 AFTPHQ6ULP2 937 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 TRAM1L1Q8N609 369 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 TP53I13Q8NBR0 393 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 DENND6BQ8NEG7 585 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 OR4L1Q8NH43 312 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 FOXJ1Q92949 421 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 CENPTQ96BT3 561 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 BIRC7Q96CA5 298 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 AP2M1Q96CW1 435 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 ZSCAN5AQ9BUG6 496 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 FUT8Q9BYC5 575 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 DUSP15Q9H1R2 295 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 MOCS1Q9NZB8 636 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 DMTF1Q9Y222 760 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.29□□□□□ -0.12
UPF1-211ENST00000600868 PLXNA2O75051 1894 aa14.29□□□□□ -0.12
UPF1-211ENST00000600868 GOLGA8CPA6NN73 597 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 SLC31A1O15431 190 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
UPF1-211ENST00000600868 FSBPO95073 299 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 PRAMEF1O95521 474 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 GOT2P00505 430 aaKnown RBP14.28□□□□□ -0.12
UPF1-211ENST00000600868 PYGLP06737 847 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 TEAD1P28347 426 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 MC4RP32245 332 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 PHBP35232 272 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 CHRNA6Q15825 494 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 WSCD2Q2TBF2 565 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 ALS2CLQ60I27 953 aa14.28□□□□□ -0.12
UPF1-211ENST00000600868 PDPK2PQ6A1A2 396 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms