RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SOD1P00441 154 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 PSMA3P25788 255 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 NMBRP28336 390 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 ECHS1P30084 290 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 AKT2P31751 481 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 NUDT1P36639 197 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 CARSP49589 748 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 ARL4CP56559 192 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 DCDC1P59894 354 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 HIF1AQ16665 826 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 WDR45BQ5MNZ6 344 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 HP1BP3Q5SSJ5 553 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 HENMT1Q5T8I9 393 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 ESRP1Q6NXG1 681 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 ZNF765Q7L2R6 523 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 IGDCC3Q8IVU1 814 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 OR13J1Q8NGT2 312 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 IFT81Q8WYA0 676 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 AP2M1Q96CW1 435 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 KIFC1Q9BW19 673 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 C1QTNF7Q9BXJ2 289 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 TM9SF3Q9HD45 589 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 IL26Q9NPH9 171 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 NLE1Q9NVX2 485 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 SMG5Q9UPR3 1016 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 FNDC3AQ9Y2H6 1198 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 PKP3Q9Y446 797 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 V9GYY5 206 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 CACNA1HO95180 2353 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 GON4LQ3T8J9 2241 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 POM121BA6NF01 834 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 E7ESA3 106 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 WNT1P04628 370 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 CA5AP35218 305 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 SPAM1P38567 509 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 XIAPP98170 497 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 CAV1Q03135 178 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 FASTKD3Q14CZ7 662 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 DNAJC21Q5F1R6 531 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 CASC4Q6P4E1 433 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 LAYNQ6UX15 382 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 PDIK1LQ8N165 341 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 SUMF1Q8NBK3 374 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 PIGKQ92643 395 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 MFSD3Q96ES6 412 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 CDKN2AIPNLQ96HQ2 116 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 TBATAQ96M53 351 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 IRF2BPLQ9H1B7 796 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 MRM3Q9HC36 420 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 TREX1Q9NSU2 369 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 PILRBQ9UKJ0 227 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 RIMKLBQ9ULI2 386 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 MAD1L1Q9Y6D9 718 aa19.93■□□□□ 0.78
SHKBP1-222ENST00000600320 A0A1W2PR77 199 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 FADS2P1A8MWK0 482 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 GPR39O43194 453 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 EPN2O95208 641 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 NBL1P41271 181 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 ELK3P41970 407 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PDE1BQ01064 536 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 ACVR1Q04771 509 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 DPTQ07507 201 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PDIA2Q13087 525 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 CBLBQ13191 982 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PEX6Q13608 980 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 CHRNA6Q15825 494 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PEAR1Q5VY43 1037 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 RAET1GQ6H3X3 334 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PNCKQ6P2M8 343 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 FAM151BQ6UXP7 276 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 ABI3BPQ7Z7G0 1075 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 NLRP8Q86W28 1048 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 IFT20Q8IY31 132 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PTCD2Q8WV60 388 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 STAMBPL1Q96FJ0 436 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 FCRL3Q96P31 734 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 PLEKHG4BQ96PX9 1271 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 SUDS3Q9H7L9 328 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 ANKZF1Q9H8Y5 726 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 AASDHPPTQ9NRN7 309 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 RAD18Q9NS91 495 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 KCTD5Q9NXV2 234 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 HS3ST3A1Q9Y663 406 aa19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 ZNF106Q9H2Y7 1883 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-222ENST00000600320 CCDC162PA2VCL2 907 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 FPGTO14772 594 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 GPR1P46091 355 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 PFN3P60673 137 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 RACK1P63244 317 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 LAMB3Q13751 1172 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 HLTFQ14527 1009 aaKnown RBP eCLIP19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 INPP5AQ14642 412 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 KYAT3Q6YP21 454 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 NLRP9Q7RTR0 991 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 ANKMY2Q8IV38 441 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 TRAM1L1Q8N609 369 aa19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 ZNF669Q96BR6 464 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-222ENST00000600320 LOXL4Q96JB6 756 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 274.7 ms