RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 USP7Q93009 1102 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 TMEM159Q96B96 161 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 CWC15Q9P013 229 aaKnown RBP18.86■□□□□ 0.61
FARP1-229ENST00000600190 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 SCN8AQ9UQD0 1980 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 PRSS38A1L453 326 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 PDE2AO00408 941 aaPredicted RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 TRAFD1O14545 582 aaPredicted RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 NUDT21O43809 227 aaKnown RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 COMTP21964 271 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 ETV5P41161 510 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 CETN2P41208 172 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 KCNC4Q03721 635 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 NFATC3Q12968 1075 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 LINC00303Q3SY05 128 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 AMZ1Q400G9 498 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 MAP9Q49MG5 647 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 MANEAQ5SRI9 462 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 LRRC38Q5VT99 294 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 DENND2CQ68D51 928 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 ZFAND4Q86XD8 727 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 PDCD6IPQ8WUM4 868 aaKnown RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 EXTL1Q92935 676 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 COL26A1Q96A83 441 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 NSMCE3Q96MG7 304 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 DESI2Q9BSY9 194 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 FAM117AQ9C073 453 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 SEMA6CQ9H3T2 930 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 CLMPQ9H6B4 373 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 CARS2Q9HA77 564 aaKnown RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 RDH14Q9HBH5 336 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 PCDH18Q9HCL0 1135 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 SPATS2LQ9NUQ6 558 aaKnown RBP18.85■□□□□ 0.61
FARP1-229ENST00000600190 B4GALT6Q9UBX8 382 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 SEPT3Q9UH03 358 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 PCDHB11Q9Y5F2 797 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 MYO18BQ8IUG5 2567 aa18.85■□□□□ 0.61
FARP1-229ENST00000600190 ALDH4A1P30038 563 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 RENBPP51606 427 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 AP1S1P61966 158 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 B4GALNT1Q00973 533 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 SLC10A7Q0GE19 358 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 LBRQ14739 615 aaKnown RBP18.84■□□□□ 0.61
FARP1-229ENST00000600190 C11orf63Q6NUN7 778 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 VASH2Q86V25 355 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 PIM3Q86V86 326 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 SLITRK4Q8IW52 837 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 TP53INP2Q8IXH6 220 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 RNF10Q8N5U6 811 aaKnown RBP18.84■□□□□ 0.61
FARP1-229ENST00000600190 NUS1Q96E22 293 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 PSKH2Q96QS6 385 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 FOXJ2Q9P0K8 574 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 PCDHGC4Q9Y5F7 938 aa18.84■□□□□ 0.61
FARP1-229ENST00000600190 HEMK1Q9Y5R4 338 aaPredicted RBP18.84■□□□□ 0.61
FARP1-229ENST00000600190 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 LRRD1A4D1F6 860 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 RHPN2P1A8MT19 583 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 B4GAT1O43505 415 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 PSTPIP1O43586 416 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 MYCLP1P12525 358 aaPredicted RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 CCNB1P14635 433 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 TCF4P15884 667 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 AMPD1P23109 780 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 KDELR1P24390 212 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 MAZP56270 477 aaKnown RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 OR1D5P58170 312 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 TAS2R40P59535 323 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 ATP13A4Q4VNC1 1196 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 CYP4V2Q6ZWL3 525 aaPredicted RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 ZSCAN1Q8NBB4 408 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 ZDHHC1Q8WTX9 485 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 NSMCE1Q8WV22 266 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 UBE2Q2Q8WVN8 375 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 COQ10AQ96MF6 247 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 CSPG4P5Q96PW8 444 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 ZNF670Q9BS34 389 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 PHPT1Q9NRX4 125 aaPredicted RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 AKAP7Q9P0M2 348 aaPredicted RBP18.83■□□□□ 0.6
FARP1-229ENST00000600190 TFR2Q9UP52 801 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 ADGRG1Q9Y653 693 aa18.83■□□□□ 0.6
FARP1-229ENST00000600190 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 GOLGA6CA6NDK9 693 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 GOLGA6BA6NDN3 693 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 C9orf172C9J069 976 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 CPNE6O95741 557 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 ITGB2P05107 769 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 FGF1P05230 155 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 GOLGA6DP0CG33 693 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 ZFXP17010 805 aaPredicted RBP18.82■□□□□ 0.6
FARP1-229ENST00000600190 GNPDA1P46926 289 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 ILF3Q12906 894 aaKnown RBP eCLIP18.82■□□□□ 0.6
FARP1-229ENST00000600190 BIRC2Q13490 618 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 ZNF235Q14590 738 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 C16orf72Q14CZ0 275 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 CNGA3Q16281 694 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 TMCO4Q5TGY1 634 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 TMEM164Q5U3C3 297 aa18.82■□□□□ 0.6
FARP1-229ENST00000600190 TXNRD3NBQ6F5E7 133 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms