RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TRNAU1APQ9NX07 287 aaKnown RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 GOLGA6AQ9NYA3 693 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 TMEM9Q9P0T7 183 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 CD84Q9UIB8 345 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 PCYT1BQ9Y5K3 369 aaPredicted RBP14.64□□□□□ -0.07
IRF3-223ENST00000599223 SCINQ9Y6U3 715 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 PTPN13Q12923 2485 aa14.64□□□□□ -0.07
IRF3-223ENST00000599223 SPENQ96T58 3664 aaKnown RBP14.63□□□□□ -0.07
IRF3-223ENST00000599223 COL12A1Q99715 3063 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 MFSD11O43934 449 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 CD48P09326 243 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 CD1CP29017 333 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 ADCY8P40145 1251 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 ARL4AP40617 200 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 MMP13P45452 471 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 CTBSQ01459 385 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 KLHL30Q0D2K2 578 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 MMRN1Q13201 1228 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 MANEAQ5SRI9 462 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 NKAIN2Q5VXU1 208 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 LRRC66Q68CR7 880 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 PRICKLE2Q7Z3G6 844 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 TECPR1Q7Z6L1 1165 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 PIH1D2Q8WWB5 315 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 AGAP2Q99490 1192 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 TRIM5Q9C035 493 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 ISCUQ9H1K1 167 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
IRF3-223ENST00000599223 A0A1B0GTH6 734 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 A0A1W2PQC6 194 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 RHPN2P1A8MT19 583 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 GOLGA6L6A8MZA4 724 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 PSMD11O00231 422 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 PDE2AO00408 941 aaPredicted RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 PPM1DO15297 605 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 FZD6O60353 706 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 MAP3K6O95382 1288 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 EML2O95834 649 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 PTMAP06454 111 aaKnown RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 TPM3P06753 285 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 IVLP07476 585 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 FGF3P11487 239 aaPredicted RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 ITGB6P18564 788 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 MPSTP25325 297 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 TEAD1P28347 426 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 HGSNATQ68CP4 663 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 PIM3Q86V86 326 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 ZNF761Q86XN6 746 aaPredicted RBP14.62□□□□□ -0.07
IRF3-223ENST00000599223 SCAMP4Q969E2 229 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 SCRN2Q96FV2 425 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 THAP2Q9H0W7 228 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 ABCG8Q9H221 673 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 NT5MQ9NPB1 228 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 TMEM98Q9Y2Y6 226 aa14.62□□□□□ -0.07
IRF3-223ENST00000599223 IGHV1OR21-1A0A087WYE8 117 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 A0A1W2PQ67 120 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 CBFA2T2O43439 604 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ITGB2P05107 769 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 MYBL1P10243 752 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 THRAP10827 490 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 IL4RP24394 825 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ACTR1BP42025 376 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 CDH6P55285 790 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ACTR1AP61163 376 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 DSC2Q02487 901 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 DPTQ07507 201 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ARMC12Q5T9G4 340 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 MARC1Q5VT66 337 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 SARM1Q6SZW1 724 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ADAMTSL4Q6UY14 1074 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 USP45Q70EL2 814 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 MARK2Q7KZI7 788 aaKnown RBP14.61□□□□□ -0.07
IRF3-223ENST00000599223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.61□□□□□ -0.07
IRF3-223ENST00000599223 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 NIPA2Q8N8Q9 360 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 LRRN4Q8WUT4 740 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 TEKT4Q8WW24 435 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 SCARF2Q96GP6 870 aaPredicted RBP14.61□□□□□ -0.07
IRF3-223ENST00000599223 OR2M4Q96R27 311 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 MRPL47Q9HD33 250 aaKnown RBP14.61□□□□□ -0.07
IRF3-223ENST00000599223 STARD5Q9NSY2 213 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 PPIL1Q9Y3C6 166 aa14.61□□□□□ -0.07
IRF3-223ENST00000599223 ZNF106Q9H2Y7 1883 aaKnown RBP14.61□□□□□ -0.07
IRF3-223ENST00000599223 RELNP78509 3460 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 HGSO14964 777 aaPredicted RBP14.6□□□□□ -0.07
IRF3-223ENST00000599223 SERPINB6P35237 376 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 GPR1P46091 355 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 ARSEP51690 589 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 STC1P52823 247 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 LIMK2P53671 638 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 PTSQ03393 145 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 CLCA4Q14CN2 919 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 TBR1Q16650 682 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 BOLA3Q53S33 107 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 RALGPS1Q5JS13 557 aa14.6□□□□□ -0.07
IRF3-223ENST00000599223 NCBP2-AS2Q69YL0 99 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms