RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FTLP02792 175 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 MYCLP1P12525 358 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 CSF2RBP32927 897 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 GNPDA1P46926 289 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 POLD2P49005 469 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 ATP1A2P50993 1020 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 OGDHQ02218 1023 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 BCL2L1Q07817 233 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 NSUN2Q08J23 767 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SQSTM1Q13501 440 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 ACOX1Q15067 660 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SLC18A3Q16572 532 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 CLPPQ16740 277 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 CA9Q16790 459 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 PPP1R15BQ5SWA1 713 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SLC30A9Q6PML9 568 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 CCDC170Q8IYT3 715 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 CACNA2D3Q8IZS8 1091 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 NAGSQ8N159 534 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 IL22RA1Q8N6P7 574 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 OR4D9Q8NGE8 314 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 TRIM11Q96F44 468 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SPRY4Q9C004 299 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 TRNAU1APQ9NX07 287 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SEPT3Q9UH03 358 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SUFUQ9UMX1 484 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 PLEKHM1Q9Y4G2 1056 aa16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 SPTBN1Q01082 2364 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 PRRC2CQ9Y520 2896 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-215ENST00000597649 UNC79Q9P2D8 2635 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 IGHV1OR21-1A0A087WYE8 117 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 GPR3P46089 330 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 SCNN1BP51168 640 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 CTBSQ01459 385 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 TRA2AQ13595 282 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 PTPRRQ15256 657 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 SPA17Q15506 151 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 CNGA3Q16281 694 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 HEATR4Q86WZ0 1026 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 TP53INP2Q8IXH6 220 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 MCOLN2Q8IZK6 566 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 MCEEQ96PE7 176 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 CNPY3Q9BT09 278 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 DDA1Q9BW61 102 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 GSDMCQ9BYG8 508 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 ZNF71Q9NQZ8 489 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 SLC39A1Q9NY26 324 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 TUBD1Q9UJT1 453 aa16.42■□□□□ 0.22
SHKBP1-215ENST00000597649 RP1L1Q8IWN7 2480 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 PDE2AO00408 941 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 DUX1O43812 170 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 RAD1O60671 282 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 MYBL1P10243 752 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 THRAP10827 490 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CR2P20023 1033 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 ADCY8P40145 1251 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CASRP41180 1078 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CCR10P46092 362 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 AIF1P55008 147 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 TPI1P60174 286 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 POLR2LP62875 67 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 ILF3Q12906 894 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 ASTE1Q2TB18 679 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 HSD11B1LQ7Z5J1 315 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 BMPERQ8N8U9 685 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 NUS1Q96E22 293 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 ISCUQ9H1K1 167 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 PHPT1Q9NRX4 125 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 SPTLC3Q9NUV7 552 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 PILRAQ9UKJ1 303 aa16.41■□□□□ 0.22
SHKBP1-215ENST00000597649 CENPEQ02224 2701 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 MYO9AB2RTY4 2548 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ANKRD62A6NC57 917 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ARHGAP42A6NI28 874 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 SOWAHDA6NJG2 315 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 B4E171 279 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 GP1BBP13224 206 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 FECHP22830 423 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 CSTF2P33240 577 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ETV3P41162 512 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 TSPAN7P41732 249 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 CDK3Q00526 305 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ANKS6Q68DC2 871 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 DNAJC24Q6P3W2 148 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 RFLNAQ6ZTI6 216 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ARFGAP1Q8N6T3 406 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 NPWQ8N729 165 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 SLC45A3Q96JT2 553 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 PDP2Q9P2J9 529 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 MYO1AQ9UBC5 1043 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 SLC17A4Q9Y2C5 497 aa16.4■□□□□ 0.22
SHKBP1-215ENST00000597649 MAN2B2Q9Y2E5 1009 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms