RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SGSM3Q96HU1 749 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 PKNOX2Q96KN3 472 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 OSBPL6Q9BZF3 934 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 EURLQ9NYK6 297 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 TBK1Q9UHD2 729 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 LGALS13Q9UHV8 139 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 ZNF180Q9UJW8 692 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 APPL1Q9UKG1 709 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 PSAT1Q9Y617 370 aa14.62□□□□□ -0.07
VRK3-212ENST00000596814 GLYATL1P3A0A0U1RQE8 302 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CD3EAPO15446 510 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 RGS16O15492 202 aaPredicted RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 FAM155BO75949 473 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 PRAMEF1O95521 474 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 GABRG2P18507 467 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 FOXN2P32314 431 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 LIG3P49916 1009 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 PTPN5P54829 565 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 XIAPP98170 497 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 SFSWAPQ12872 951 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 FASTKD1Q53R41 847 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 HSP90B2PQ58FF3 399 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 MRNIPQ6NTE8 343 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 KIAA0408Q6ZU52 694 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 STRA8Q7Z7C7 330 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CILP2Q8IUL8 1156 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 C2CD4AQ8NCU7 369 aaPredicted RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 GPR26Q8NDV2 337 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 GPR150Q8NGU9 434 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 HMGB4Q8WW32 186 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 FAM131CQ96AQ9 280 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 PLEKHG4BQ96PX9 1271 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 MARCH4Q9P2E8 410 aaPredicted RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 FBXO5Q9UKT4 447 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 SLC30A1Q9Y6M5 507 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 TRIOO75962 3097 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 RGSL1A5PLK6 1076 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 TSPAN6O43657 245 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 SRP72O76094 671 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 F7P08709 466 aaPredicted RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 C6P13671 934 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 OGNP20774 298 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 SERPINB9P50453 376 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CSE1LP55060 971 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 TAS2R38P59533 333 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 DCDC1P59894 354 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 MPP1Q00013 466 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CACNG1Q06432 222 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CTBP1Q13363 440 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 ACOX1Q15067 660 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 ZRANB3Q5FWF4 1079 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 TJAP1Q5JTD0 557 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 RFLNAQ6ZTI6 216 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 USP30Q70CQ3 517 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 TAOK1Q7L7X3 1001 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 KBTBD6Q86V97 674 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 RAVER1Q8IY67 606 aaKnown RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-212ENST00000596814 CLDN23Q96B33 292 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 PGM2Q96G03 612 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 CHRDQ9H2X0 955 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 IL26Q9NPH9 171 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 MED4Q9NPJ6 270 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 RAD18Q9NS91 495 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 BCCIPQ9P287 314 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-212ENST00000596814 NFKBIL1Q9UBC1 381 aaPredicted RBP14.61□□□□□ -0.07
VRK3-212ENST00000596814 FZD4Q9ULV1 537 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
VRK3-212ENST00000596814 IQANK1A0A1B0GTG1 560 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 GOLGA8CPA6NN73 597 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 GAPDHSO14556 408 aaPredicted RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 PLRG1O43660 514 aaKnown RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 SYF2O95926 243 aaKnown RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 PRSS56P0CW18 603 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 ITGALP20701 1170 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 ETV3P41162 512 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 SIGLEC14Q08ET2 396 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 SEMA3AQ14563 771 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 AARS2Q5JTZ9 985 aaKnown RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 GRTP1Q5TC63 336 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 Q6ZVL8 140 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 SDCCAG8Q86SQ7 713 aaPredicted RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 TSTD1Q8NFU3 115 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 ARL8AQ96BM9 186 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 COQ10AQ96MF6 247 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 RBBP8Q99708 897 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 CDH19Q9H159 772 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 STMN4Q9H169 189 aaPredicted RBP14.6□□□□□ -0.07
VRK3-212ENST00000596814 CD84Q9UIB8 345 aa14.6□□□□□ -0.07
VRK3-212ENST00000596814 BPTFQ12830 3046 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 WNT9AO14904 365 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 LZTS3O60299 673 aaPredicted RBP14.59□□□□□ -0.07
VRK3-212ENST00000596814 MMP20O60882 483 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 KRT37O76014 449 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 KRT38O76015 456 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 PCDH8O95206 1070 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 GM2AP17900 193 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 CNTFP26441 200 aa14.59□□□□□ -0.07
VRK3-212ENST00000596814 PMLP29590 882 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms