RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MRGPRX2Q96LB1 330 aa21.02■□□□□ 0.96
PNKP-209ENST00000596726 BOCQ9BWV1 1114 aa21.02■□□□□ 0.96
PNKP-209ENST00000596726 TMEM121BQ9BXQ6 578 aaPredicted RBP21.02■□□□□ 0.96
PNKP-209ENST00000596726 FRMD8Q9BZ67 464 aaPredicted RBP21.02■□□□□ 0.96
PNKP-209ENST00000596726 MRPL40Q9NQ50 206 aaKnown RBP21.02■□□□□ 0.96
PNKP-209ENST00000596726 SCN8AQ9UQD0 1980 aa21.02■□□□□ 0.96
PNKP-209ENST00000596726 ASXL3Q9C0F0 2248 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 RGSL1A5PLK6 1076 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 YY2O15391 372 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 CELA2BP08218 269 aaPredicted RBP21.01■□□□□ 0.95
PNKP-209ENST00000596726 CTSEP14091 401 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 GPR1P46091 355 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 ELOCQ15369 112 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 CCDC157Q569K6 752 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 DARS2Q6PI48 645 aaKnown RBP21.01■□□□□ 0.95
PNKP-209ENST00000596726 LVRNQ6Q4G3 990 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 LYSMD3Q7Z3D4 306 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 TMC3Q7Z5M5 1100 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 TTC13Q8NBP0 860 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 CCHCR1Q8TD31 782 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 CNTNAP3BQ96NU0 1288 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 AGAP2Q99490 1192 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 FERMT1Q9BQL6 677 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 CNTNAP3Q9BZ76 1288 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 GBA3Q9H227 469 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 ZFYVE1Q9HBF4 777 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 PKD2L2Q9NZM6 624 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 RSPH14Q9UHP6 348 aa21.01■□□□□ 0.95
PNKP-209ENST00000596726 MYLKQ15746 1914 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ARHGEF17Q96PE2 2063 aaPredicted RBP21■□□□□ 0.95
PNKP-209ENST00000596726 GOLGA6CA6NDK9 693 aa21■□□□□ 0.95
PNKP-209ENST00000596726 GOLGA6BA6NDN3 693 aa21■□□□□ 0.95
PNKP-209ENST00000596726 GOLGA6L9A6NEM1 432 aa21■□□□□ 0.95
PNKP-209ENST00000596726 FUCA1P04066 466 aa21■□□□□ 0.95
PNKP-209ENST00000596726 CEACAM5P06731 702 aa21■□□□□ 0.95
PNKP-209ENST00000596726 PYGLP06737 847 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ANXA6P08133 673 aa21■□□□□ 0.95
PNKP-209ENST00000596726 PIRTP0C851 137 aa21■□□□□ 0.95
PNKP-209ENST00000596726 GOLGA6DP0CG33 693 aa21■□□□□ 0.95
PNKP-209ENST00000596726 MYF5P13349 255 aa21■□□□□ 0.95
PNKP-209ENST00000596726 DAB2P98082 770 aa21■□□□□ 0.95
PNKP-209ENST00000596726 MPP3Q13368 585 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ANKRD20A2Q5SQ80 823 aa21■□□□□ 0.95
PNKP-209ENST00000596726 C6orf132Q5T0Z8 1188 aa21■□□□□ 0.95
PNKP-209ENST00000596726 HENMT1Q5T8I9 393 aaKnown RBP21■□□□□ 0.95
PNKP-209ENST00000596726 MEI1Q5TIA1 1274 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ANKRD20A1Q5TYW2 823 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ANKRD20A3Q5VUR7 823 aa21■□□□□ 0.95
PNKP-209ENST00000596726 CCDC70Q6NSX1 233 aa21■□□□□ 0.95
PNKP-209ENST00000596726 CCNI2Q6ZMN8 369 aaPredicted RBP21■□□□□ 0.95
PNKP-209ENST00000596726 GALNT15Q8N3T1 639 aa21■□□□□ 0.95
PNKP-209ENST00000596726 GATA6Q92908 595 aa21■□□□□ 0.95
PNKP-209ENST00000596726 SRPK1Q96SB4 655 aaKnown RBP21■□□□□ 0.95
PNKP-209ENST00000596726 GORASP1Q9BQQ3 440 aa21■□□□□ 0.95
PNKP-209ENST00000596726 RIOK2Q9BVS4 552 aaKnown RBP21■□□□□ 0.95
PNKP-209ENST00000596726 LZTFL1Q9NQ48 299 aa21■□□□□ 0.95
PNKP-209ENST00000596726 GOLGA6AQ9NYA3 693 aa21■□□□□ 0.95
PNKP-209ENST00000596726 ZNF711Q9Y462 761 aa21■□□□□ 0.95
PNKP-209ENST00000596726 TCRBV7S2A1N4TA0A589 114 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 PRSS38A1L453 326 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 KCNN4O15554 427 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 ZNF189O75820 626 aaPredicted RBP20.99■□□□□ 0.95
PNKP-209ENST00000596726 DUSP3P51452 185 aaPredicted RBP20.99■□□□□ 0.95
PNKP-209ENST00000596726 ITPRIPL1Q6GPH6 555 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 SCARF2Q96GP6 870 aaPredicted RBP20.99■□□□□ 0.95
PNKP-209ENST00000596726 COX14Q96I36 57 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 FAM83DQ9H4H8 585 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 CYP4F12Q9HCS2 524 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 NCKIPSDQ9NZQ3 722 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 NFKBIL1Q9UBC1 381 aaPredicted RBP20.99■□□□□ 0.95
PNKP-209ENST00000596726 SHOC2Q9UQ13 582 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 SLC17A4Q9Y2C5 497 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 R3HDM2Q9Y2K5 976 aaKnown RBP20.99■□□□□ 0.95
PNKP-209ENST00000596726 SPO11Q9Y5K1 396 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 RP1P56715 2156 aa20.99■□□□□ 0.95
PNKP-209ENST00000596726 F5H423 210 aaPredicted RBP20.98■□□□□ 0.95
PNKP-209ENST00000596726 NRDCO43847 1150 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 SLC1A5Q15758 541 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 SIRPB2Q5JXA9 342 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 GKN2Q86XP6 184 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 SLC35B2Q8TB61 432 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 HIC2Q96JB3 615 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 SPATA13Q96N96 652 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 TMEM168Q9H0V1 697 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 EVA1BQ9NVM1 165 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 CNOT6Q9ULM6 557 aaKnown RBP20.98■□□□□ 0.95
PNKP-209ENST00000596726 PPP2R2CQ9Y2T4 447 aa20.98■□□□□ 0.95
PNKP-209ENST00000596726 EME2A4GXA9 379 aaPredicted RBP20.97■□□□□ 0.95
PNKP-209ENST00000596726 C5orf60A6NFR6 353 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 ANXA9O76027 345 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 PTMAP06454 111 aaKnown RBP20.97■□□□□ 0.95
PNKP-209ENST00000596726 GP1BAP07359 652 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 IVLP07476 585 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 HLA-DPA1P20036 260 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 CHRNA4P43681 627 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 GEMP55040 296 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 DCDC1P59894 354 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 E2F1Q01094 437 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 RPS6KA1Q15418 735 aa20.97■□□□□ 0.95
PNKP-209ENST00000596726 TMPRSS12Q86WS5 348 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms