RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 RGSL1A5PLK6 1076 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 CCL22O00626 93 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 CDX4O14627 284 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 GPR39O43194 453 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 LZTS3O60299 673 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 ARNTP27540 789 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 TEAD1P28347 426 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 ADCY8P40145 1251 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 NXPH1P58417 271 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 DCDC1P59894 354 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SLC7A5Q01650 507 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SPEM2Q0P670 501 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 EIF2B5Q13144 721 aaKnown RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 ARHGEF7Q14155 803 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 FZD2Q14332 565 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 POU6F1Q14863 301 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 DUOXA1Q1HG43 343 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 KIF19Q2TAC6 998 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 KHDC1Q4VXA5 237 aaKnown RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 PRAMEF14Q5SWL7 426 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 IZUMO3Q5VZ72 239 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 KYAT3Q6YP21 454 aaKnown RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 Q6ZSR6 202 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 IQCHQ86VS3 1027 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 PPIL6Q8IXY8 311 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 NRSN1Q8IZ57 195 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 NDUFAF2Q8N183 169 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 OR4K2Q8NGD2 314 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 OR2I1PQ8NGU4 316 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SNX19Q92543 992 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 NUS1Q96E22 293 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 CCDC97Q96F63 343 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 RUNDC3BQ96NL0 473 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 FCRL3Q96P31 734 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 SERPINB12Q96P63 405 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SRPK1Q96SB4 655 aaKnown RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 GPR63Q9BZJ6 419 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 FAM83DQ9H4H8 585 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 CHRAC1Q9NRG0 131 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 TREX1Q9NSU2 369 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SEMA4GQ9NTN9 838 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 NLE1Q9NVX2 485 aaPredicted RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
LIG1-210ENST00000596332 ANKRD6Q9Y2G4 727 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 FNDC3AQ9Y2H6 1198 aaKnown RBP10.53□□□□□ -0.72
LIG1-210ENST00000596332 OR1A2Q9Y585 309 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 SNX11Q9Y5W9 270 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 ST14Q9Y5Y6 855 aa10.53□□□□□ -0.72
LIG1-210ENST00000596332 GVINP1Q7Z2Y8 2422 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 SPTY2D1-AS1A0A0U1RR47 76 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 LNP1A1A4G5 178 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 TMEM202A6NGA9 273 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 GOLGA8MH3BSY2 632 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 H7C0S8 307 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 TLR4O00206 839 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A9O60656 530 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 BANF1O75531 89 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 PRSS56P0CW18 603 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 GIMD1P0DJR0 217 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 MLNP12872 115 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A6P19224 532 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 LPOP22079 712 aaPredicted RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A1P22309 533 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A4P22310 534 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 MGAT1P26572 445 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ECHS1P30084 290 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 AKT2P31751 481 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A3P35503 534 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A5P35504 534 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ACTN2P35609 894 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 NPY2RP49146 381 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 CDKN1CP49918 316 aaPredicted RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 AFF3P51826 1226 aaKnown RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 ITGA8P53708 1063 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 DRG2P55039 364 aaKnown RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 SESN2P58004 480 aaPredicted RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 CHRNA6Q15825 494 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 CSRP2Q16527 193 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 TRIM61Q5EBN2 209 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 CCDC70Q6NSX1 233 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ADAMTSL4Q6UY14 1074 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 KANSL1Q7Z3B3 1105 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 GLT6D1Q7Z4J2 308 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 HOOK3Q86VS8 718 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 RUBCNQ92622 972 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 ART4Q93070 314 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 SCARF2Q96GP6 870 aaPredicted RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 CDKN2AIPNLQ96HQ2 116 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 DNAJC1Q96KC8 554 aaKnown RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 TBATAQ96M53 351 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 PLEKHG4BQ96PX9 1271 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 KIFC1Q9BW19 673 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 TRIM31Q9BZY9 425 aa10.52□□□□□ -0.73
LIG1-210ENST00000596332 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
LIG1-210ENST00000596332 UGT1A7Q9HAW7 530 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms