RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 NLRP8Q86W28 1048 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 MARCH9Q86YJ5 346 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 KLHDC8BQ8IXV7 354 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 TTC30BQ8N4P2 665 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 CHCHD4Q8N4Q1 142 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 GLIS1Q8NBF1 620 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 TTC13Q8NBP0 860 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 GPR26Q8NDV2 337 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 TRIM58Q8NG06 486 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 OR56A4Q8NGH8 313 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 OR4C6Q8NH72 309 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 UBE2Q2Q8WVN8 375 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 ALS2CR12Q96Q35 445 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 APOL2Q9BQE5 337 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 FICDQ9BVA6 458 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
VRK3-210ENST00000596121 WDR26Q9H7D7 661 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 ZFYVE1Q9HBF4 777 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 TRMT1Q9NXH9 659 aaKnown RBP11.11□□□□□ -0.63
VRK3-210ENST00000596121 KLQ9UEF7 1012 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 FTSJ1Q9UET6 329 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
VRK3-210ENST00000596121 TMPRSS11EQ9UL52 423 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 PYCARDQ9ULZ3 195 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 TMEM98Q9Y2Y6 226 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 PCYT1BQ9Y5K3 369 aaPredicted RBP11.11□□□□□ -0.63
VRK3-210ENST00000596121 ST14Q9Y5Y6 855 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 LRP4O75096 1905 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 CHD8Q9HCK8 2581 aa11.11□□□□□ -0.63
VRK3-210ENST00000596121 AKAP13Q12802 2813 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GOLGA6CA6NDK9 693 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GOLGA6BA6NDN3 693 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GOLGA6L9A6NEM1 432 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 CACNB4O00305 520 aaPredicted RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 CASC3O15234 703 aaKnown RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 YY2O15391 372 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 HYAL3O43820 417 aaPredicted RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 USP12O75317 370 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 GOLGA6DP0CG33 693 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 MYCLP1P12525 358 aaPredicted RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 ETS1P14921 441 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 BPIP17213 487 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GPR1P46091 355 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 ACADVLP49748 655 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 SNX1Q13596 522 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GSE1Q14687 1217 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 HENMT1Q5T8I9 393 aaKnown RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 SEL1L2Q5TEA6 688 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 KCTD11Q693B1 232 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 RAB44Q7Z6P3 723 aaPredicted RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 TAB3Q8N5C8 712 aaPredicted RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 CCL4L1Q8NHW4 92 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 RTP4Q96DX8 246 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 COX14Q96I36 57 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 APOLD1Q96LR9 279 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 FAM83DQ9H4H8 585 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 BPIFA1Q9NP55 256 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 GOLGA6AQ9NYA3 693 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 NLGN3Q9NZ94 848 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 KCTD3Q9Y597 815 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 OAS3Q9Y6K5 1087 aaKnown RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 CSNK1G3Q9Y6M4 447 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 DGKBQ9Y6T7 804 aa11.1□□□□□ -0.63
VRK3-210ENST00000596121 TPRP12270 2363 aaKnown RBP11.1□□□□□ -0.63
VRK3-210ENST00000596121 COL5A1P20908 1838 aaPredicted RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 ASXL3Q9C0F0 2248 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 RGSL1A5PLK6 1076 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 LMO7DNF2Z398 122 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 H3BM21 787 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 INPP4BO15327 924 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 BUD23O43709 281 aaKnown RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 NRDCO43847 1150 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 CEP104O60308 925 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 ANXA9O76027 345 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 RASGRP1O95267 797 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 FGGP02679 453 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 SLC4A1P02730 911 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 HTR1BP28222 390 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 GEMP55040 296 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 FOXK2Q01167 660 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 PARP6Q2NL67 630 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 CCDC157Q569K6 752 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 ZNF648Q5T619 568 aaPredicted RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 ALS2CLQ60I27 953 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 ITPRIPL1Q6GPH6 555 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 DOK6Q6PKX4 331 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 NRROSQ86YC3 692 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 RAVER1Q8IY67 606 aaKnown RBP11.09□□□□□ -0.63
VRK3-210ENST00000596121 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
VRK3-210ENST00000596121 BTN2A2Q8WVV5 523 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms