RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CLDN7O95471 211 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 SOD1P00441 154 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 KRT1P04264 644 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 PYGLP06737 847 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 TNNT1P13805 278 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 ZFXP17010 805 aaPredicted RBP23.39■■□□□ 1.33
LSM4-204ENST00000594828 CD86P42081 329 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 STC1P52823 247 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 IFI35P80217 286 aaPredicted RBP23.39■■□□□ 1.33
LSM4-204ENST00000594828 TLE3Q04726 772 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 AP1B1Q10567 949 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 HLTFQ14527 1009 aaKnown RBP eCLIP23.39■■□□□ 1.33
LSM4-204ENST00000594828 PDK1Q15118 436 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 TCEAL1Q15170 157 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 SOWAHCQ53LP3 525 aaPredicted RBP23.39■■□□□ 1.33
LSM4-204ENST00000594828 DOK6Q6PKX4 331 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 ADAMTSL4Q6UY14 1074 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 NRROSQ86YC3 692 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 RFX6Q8HWS3 928 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 CCNJLQ8IV13 435 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 RHOT1Q8IXI2 618 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 NRSN1Q8IZ57 195 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 CNTD1Q8N815 330 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 PRR11Q96HE9 360 aaPredicted RBP23.39■■□□□ 1.33
LSM4-204ENST00000594828 TRIM5Q9C035 493 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 PRORYQ9H606 182 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 DDX56Q9NY93 547 aaKnown RBP23.39■■□□□ 1.33
LSM4-204ENST00000594828 RNF215Q9Y6U7 377 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 NBEAQ8NFP9 2946 aa23.39■■□□□ 1.33
LSM4-204ENST00000594828 D6RAR5 112 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 NUDT21O43809 227 aaKnown RBP23.38■■□□□ 1.33
LSM4-204ENST00000594828 IVLP07476 585 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 MMP2P08253 660 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 ZBTB17Q13105 803 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 B3GNT8Q7Z7M8 397 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 RAVER1Q8IY67 606 aaKnown RBP23.38■■□□□ 1.33
LSM4-204ENST00000594828 ARL14Q8N4G2 192 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 PTCD2Q8WV60 388 aaKnown RBP23.38■■□□□ 1.33
LSM4-204ENST00000594828 LIN37Q96GY3 246 aaPredicted RBP23.38■■□□□ 1.33
LSM4-204ENST00000594828 LYSMD1Q96S90 227 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 TAAR2Q9P1P5 351 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 TMEM98Q9Y2Y6 226 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 HYOU1Q9Y4L1 999 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 ITPR1Q14643 2758 aa23.38■■□□□ 1.33
LSM4-204ENST00000594828 ZFYVE26Q68DK2 2539 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 ANKRD66B4E2M5 251 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 FGF1P05230 155 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 COMTP21964 271 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 AK4P27144 223 aaPredicted RBP23.37■■□□□ 1.33
LSM4-204ENST00000594828 SKOR1P84550 965 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 CTBSQ01459 385 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 SLC30A9Q6PML9 568 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 SARM1Q6SZW1 724 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 NPNTQ6UXI9 565 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 EXD1Q8NHP7 514 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 ZDHHC1Q8WTX9 485 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 SCARF2Q96GP6 870 aaPredicted RBP23.37■■□□□ 1.33
LSM4-204ENST00000594828 TMEM74Q96NL1 305 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 AGAP2Q99490 1192 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 MLPHQ9BV36 600 aaPredicted RBP23.37■■□□□ 1.33
LSM4-204ENST00000594828 RIOK2Q9BVS4 552 aaKnown RBP23.37■■□□□ 1.33
LSM4-204ENST00000594828 ADGRE3Q9BY15 652 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 FOXP3Q9BZS1 431 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 STRADBQ9C0K7 418 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 EPB41L5Q9HCM4 733 aa23.37■■□□□ 1.33
LSM4-204ENST00000594828 C1orf232A0A0U1RR37 186 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 PMS2P1A4D2B8 440 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 PPP1R12AO14974 1030 aaPredicted RBP23.36■■□□□ 1.33
LSM4-204ENST00000594828 SPOPO43791 374 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 TNFSF15O95150 251 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 ADCY8P40145 1251 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 MAGEA1P43355 309 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 NOP2P46087 812 aaKnown RBP23.36■■□□□ 1.33
LSM4-204ENST00000594828 INHBCP55103 352 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 PEX6Q13608 980 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 QPCTQ16769 361 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 SPRED1Q7Z699 444 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 TRIM74Q86UV6 250 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 KCNE4Q8WWG9 221 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 FCRL3Q96P31 734 aaPredicted RBP23.36■■□□□ 1.33
LSM4-204ENST00000594828 OLFM3Q96PB7 478 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 CEP41Q9BYV8 373 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 BRD8Q9H0E9 1235 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 SEPT10Q9P0V9 454 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 ST14Q9Y5Y6 855 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 CACNA1GO43497 2377 aa23.36■■□□□ 1.33
LSM4-204ENST00000594828 CDRT15L2A8MXV6 281 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 MLLT3P42568 568 aaPredicted RBP23.35■■□□□ 1.33
LSM4-204ENST00000594828 DYNLT1P63172 113 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 EIF3IQ13347 325 aaKnown RBP23.35■■□□□ 1.33
LSM4-204ENST00000594828 FAM182AQ5T1J6 154 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 BROXQ5VW32 411 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 MFSD7Q6UXD7 560 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 NT5DC3Q86UY8 548 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 C17orf82Q86X59 251 aaPredicted RBP23.35■■□□□ 1.33
LSM4-204ENST00000594828 FBXO39Q8N4B4 442 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 TC2NQ8N9U0 490 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 CCHCR1Q8TD31 782 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 AGAP3Q96P47 875 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 OR2M4Q96R27 311 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms