RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 E2F7Q96AV8 911 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 MROQ9BYG7 248 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 PNPLA3Q9NST1 481 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TMEM248Q9NWD8 314 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 YIPF1Q9Y548 306 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 ZNF840PA6NDX5 716 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TPP1O14773 563 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 ALDOAP04075 364 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 HLA-DQB2P05538 268 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 LAG3P18627 525 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 DNAJB2P25686 324 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 CHI3L2Q15782 390 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TRIM16LQ309B1 348 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 LSM12Q3MHD2 195 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 OTOP2Q7RTS6 562 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 HMCESQ96FZ2 354 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 RMND5BQ96G75 393 aaPredicted RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 CEP295NLQ96MC4 621 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 EBF4Q9BQW3 602 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 OLAHQ9NV23 265 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 SPG21Q9NZD8 308 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 IPO11Q9UI26 975 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 RABL2BQ9UNT1 228 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 SLC8A2Q9UPR5 921 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 KIAA1671Q9BY89 1806 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TTC34A8MYJ7 566 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 RGS13O14921 159 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 MT-CYBP00156 380 aaPredicted RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 DCKP27707 260 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CERCAMQ5T4B2 595 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 TPGS2Q68CL5 300 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 TTC23LQ6PF05 361 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 FRA10AC1Q70Z53 315 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 KLHDC8BQ8IXV7 354 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 LILRA2Q8N149 483 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 LILRB4Q8NHJ6 448 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 ACMSDQ8TDX5 336 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 TANKQ92844 425 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 RPRD1AQ96P16 312 aaPredicted RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 GLOD4Q9HC38 313 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 RIC8BQ9NVN3 520 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 FNIP2Q9P278 1114 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 STK39Q9UEW8 545 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 DNMT3LQ9UJW3 386 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 PRSS51A0A1B0GVH4 220 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 DRGXA6NNA5 263 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 H3BMQ9 156 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 PEX11BO96011 259 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 URODP06132 367 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CHRNB1P11230 501 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 MZF1P28698 734 aaPredicted RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 ATP5C1P36542 298 aaKnown RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 GP5P40197 560 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 ATP6V0D1P61421 351 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 PLD1Q13393 1074 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 AGAP7PQ5VUJ5 663 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 ANKRD26P1Q6NSI1 321 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 TIGD7Q6NT04 549 aaPredicted RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 DDX53Q86TM3 631 aaKnown RBP15.37■□□□□ 0.05
PNKP-204ENST00000594661 CPNE9Q8IYJ1 553 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CADM3Q8N126 398 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 PDZD8Q8NEN9 1154 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 GRIN3AQ8TCU5 1115 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 OVCA2Q8WZ82 227 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CMTM5Q96DZ9 223 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 ZNF597Q96LX8 424 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 COG8Q96MW5 612 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 YME1L1Q96TA2 773 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CPNE1Q99829 537 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 RBM22Q9NW64 420 aaKnown RBP eCLIP15.37■□□□□ 0.054e-6■■■□□ 16.3
PNKP-204ENST00000594661 VPS51Q9UID3 782 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 CDC14AQ9UNH5 594 aa15.37■□□□□ 0.05
PNKP-204ENST00000594661 TMX2-CTNND1H3BSU7 103 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 J3KR12 359 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 COCHO43405 550 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 BPGMP07738 259 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 ZNF26P17031 533 aaPredicted RBP15.36■□□□□ 0.05
PNKP-204ENST00000594661 TACR2P21452 398 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 C16orf46Q6P387 395 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 TMEM135Q86UB9 458 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 TMEM199Q8N511 208 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 SLC15A4Q8N697 577 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 MINDY2Q8NBR6 621 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 FCRL5Q96RD9 977 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 CDK5RAP1Q96SZ6 601 aaKnown RBP15.36■□□□□ 0.05
PNKP-204ENST00000594661 OSBPL11Q9BXB4 747 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 CAAP1Q9H8G2 361 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 AP4S1Q9Y587 144 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 CORINQ9Y5Q5 1042 aa15.36■□□□□ 0.05
PNKP-204ENST00000594661 SNAP91O60641 907 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 GLRA3O75311 464 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TPH1P17752 444 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 SLC6A4P31645 630 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TTKP33981 857 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 NPY2RP49146 381 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 RAB33AQ14088 237 aa15.35■□□□□ 0.05
PNKP-204ENST00000594661 TIGD2Q4W5G0 525 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms