RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TXNRD3NBQ6F5E7 133 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 POLNQ7Z5Q5 900 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 TECPR1Q7Z6L1 1165 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 ATPAF2Q8N5M1 289 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 HSPH1Q92598 858 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 NKD1Q969G9 470 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 SCRN2Q96FV2 425 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 CSPG4P5Q96PW8 444 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 TAAR9Q96RI9 348 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIG1-205ENST00000593425 IL17BQ9UHF5 180 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 PCDHGA3Q9Y5H0 932 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
LIG1-205ENST00000593425 SUV39H1O43463 412 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 PDHA1P08559 390 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 PCK1P35558 622 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 PRKCIP41743 596 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 MMP13P45452 471 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 GPR1P46091 355 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 BIRC2Q13490 618 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ARMC12Q5T9G4 340 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ATG14Q6ZNE5 492 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 USP45Q70EL2 814 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ZNF761Q86XN6 746 aaPredicted RBP16.29■□□□□ 0.2
LIG1-205ENST00000593425 OR4D9Q8NGE8 314 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 PIH1D2Q8WWB5 315 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ART4Q93070 314 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 SCARF2Q96GP6 870 aaPredicted RBP16.29■□□□□ 0.2
LIG1-205ENST00000593425 OR2M4Q96R27 311 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 SEMA3CQ99985 751 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 SLC12A9Q9BXP2 914 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 CDH19Q9H159 772 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ABCG8Q9H221 673 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 B3GALT1Q9Y5Z6 326 aa16.29■□□□□ 0.2
LIG1-205ENST00000593425 ZW10O43264 779 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 RARAP10276 462 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 NFKBIAP25963 317 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 UGT1A3P35503 534 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 ATP1A2P50993 1020 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 DPTQ07507 201 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 TRA2AQ13595 282 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■□□□□ 10
LIG1-205ENST00000593425 RALGPS1Q5JS13 557 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 MARC1Q5VT66 337 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 LRRC66Q68CR7 880 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 MARK2Q7KZI7 788 aaKnown RBP16.28■□□□□ 0.2
LIG1-205ENST00000593425 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 SCAMP4Q969E2 229 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 AP2M1Q96CW1 435 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 AGAP2Q99490 1192 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 NT5MQ9NPB1 228 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 RTN4Q9NQC3 1192 aaKnown RBP16.28■□□□□ 0.2
LIG1-205ENST00000593425 OCIAD1Q9NX40 245 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 AIPL1Q9NZN9 384 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 PPIL1Q9Y3C6 166 aa16.28■□□□□ 0.2
LIG1-205ENST00000593425 FZD6O60353 706 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 PPFIA2O75334 1257 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 SFTPCP11686 197 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 SKILP12757 684 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 LIFP15018 202 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 CDH6P55285 790 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 SQSTM1Q13501 440 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 IHHQ14623 411 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 PYCR3Q53H96 274 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 BOLA3Q53S33 107 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 ADAMTSL4Q6UY14 1074 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 IL22RA1Q8N6P7 574 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 AGBL5Q8NDL9 886 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 SLC37A2Q8TED4 501 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 DDA1Q9BW61 102 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 SLC25A18Q9H1K4 315 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 PCDH18Q9HCL0 1135 aa16.27■□□□□ 0.2
LIG1-205ENST00000593425 MRPL47Q9HD33 250 aaKnown RBP16.27■□□□□ 0.2
LIG1-205ENST00000593425 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
LIG1-205ENST00000593425 PCYT1BQ9Y5K3 369 aaPredicted RBP16.27■□□□□ 0.2
LIG1-205ENST00000593425 BOD1L1Q8NFC6 3051 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 TRBV23OR9-2A0A075B6M9 112 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 EML2O95834 649 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 CSTF2P33240 577 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIG1-205ENST00000593425 SERPINB6P35237 376 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 FASLGP48023 281 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 SLC25A11Q02978 314 aaKnown RBP16.26■□□□□ 0.19
LIG1-205ENST00000593425 PTSQ03393 145 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 PEX6Q13608 980 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 TMEM71Q6P5X7 295 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 FAM129CQ86XR2 697 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 TEX26Q8N6G2 289 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 TRIM11Q96F44 468 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 COX14Q96I36 57 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 ISCUQ9H1K1 167 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 SLC39A1Q9NY26 324 aa16.26■□□□□ 0.19
LIG1-205ENST00000593425 A0A0J9YYE9 177 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 EFCAB7A8K855 629 aa16.25■□□□□ 0.19
LIG1-205ENST00000593425 INPP4BO15327 924 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms