RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 UGT1A3P35503 534 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 GPR1P46091 355 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PPM1FP49593 454 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 NCAPHQ15003 741 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 CLPPQ16740 277 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PPP1R2P3Q6NXS1 205 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 MARK2Q7KZI7 788 aaKnown RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PTRH1Q86Y79 214 aaKnown RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PSTKQ8IV42 348 aaKnown RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 AGBL5Q8NDL9 886 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 OR4D9Q8NGE8 314 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 HSPH1Q92598 858 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 ZNF653Q96CK0 615 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 MGME1Q9BQP7 344 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 ZMYND15Q9H091 742 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 GEMIN8Q9NWZ8 242 aaKnown RBP17.41■□□□□ 0.38
RETREG3-212ENST00000593251 KCTD5Q9NXV2 234 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 SLC39A1Q9NY26 324 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 KCNK4Q9NYG8 393 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PCDHGA3Q9Y5H0 932 aa17.41■□□□□ 0.38
RETREG3-212ENST00000593251 PSMD11O00231 422 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 MAFKO60675 156 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 PGLSO95336 258 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 PDHA1P08559 390 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 THRAP10827 490 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 CSTF2P33240 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
RETREG3-212ENST00000593251 ARL4AP40617 200 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 TLE1Q04724 770 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 TRA2AQ13595 282 aaKnown RBP eCLIP17.4■□□□□ 0.38
RETREG3-212ENST00000593251 ASIC2Q16515 512 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 ZNF571Q7Z3V5 609 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-212ENST00000593251 POLNQ7Z5Q5 900 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 TECPR1Q7Z6L1 1165 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 FAM129CQ86XR2 697 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 ATPAF2Q8N5M1 289 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 SCAMP4Q969E2 229 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 SCRN2Q96FV2 425 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 OR2M4Q96R27 311 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 MCCC1Q96RQ3 725 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-212ENST00000593251 CDH19Q9H159 772 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 ABCG8Q9H221 673 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 PTPN13Q12923 2485 aa17.4■□□□□ 0.38
RETREG3-212ENST00000593251 EFCAB7A8K855 629 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 NFKBIAP25963 317 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 TEAD1P28347 426 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 MMP13P45452 471 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 ZNF135P52742 658 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-212ENST00000593251 DPYSL2Q16555 572 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 STX1AQ16623 288 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 SNAP47Q5SQN1 464 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 ARMC12Q5T9G4 340 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-212ENST00000593251 LRRC66Q68CR7 880 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 TXNRD3NBQ6F5E7 133 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 BORAQ6PGQ7 559 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 USP45Q70EL2 814 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 BBS5Q8N3I7 341 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 AOPEPQ8N6M6 819 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 CCDC112Q8NEF3 446 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 AP2M1Q96CW1 435 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 CSPG4P5Q96PW8 444 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 NT5MQ9NPB1 228 aa17.39■□□□□ 0.37
RETREG3-212ENST00000593251 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.39■□□□□ 0.37
RETREG3-212ENST00000593251 DOPEY2Q9Y3R5 2298 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 A8MU76 341 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 DDX3XO00571 662 aaKnown RBP eCLIP17.38■□□□□ 0.373e-16■■■■□ 25.4
RETREG3-212ENST00000593251 RAD1O60671 282 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 EML2O95834 649 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 POLE2P56282 527 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 DPTQ07507 201 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 PEX6Q13608 980 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 PYCR3Q53H96 274 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 COLEC12Q5KU26 742 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 MARC1Q5VT66 337 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 ANKS6Q68DC2 871 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 TMEM71Q6P5X7 295 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.38■□□□□ 0.37
RETREG3-212ENST00000593251 SLC37A2Q8TED4 501 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 NSMCE1Q8WV22 266 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 SCARF2Q96GP6 870 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-212ENST00000593251 AHCYL2Q96HN2 611 aaKnown RBP17.38■□□□□ 0.37
RETREG3-212ENST00000593251 CTRCQ99895 268 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 DDA1Q9BW61 102 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 MYO6Q9UM54 1294 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 PCYT1BQ9Y5K3 369 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-212ENST00000593251 SCINQ9Y6U3 715 aa17.38■□□□□ 0.37
RETREG3-212ENST00000593251 ZNF106Q9H2Y7 1883 aaKnown RBP17.37■□□□□ 0.37
RETREG3-212ENST00000593251 INPP4BO15327 924 aa17.37■□□□□ 0.37
RETREG3-212ENST00000593251 MAP3K6O95382 1288 aa17.37■□□□□ 0.37
RETREG3-212ENST00000593251 RARAP10276 462 aa17.37■□□□□ 0.37
RETREG3-212ENST00000593251 GZMAP12544 262 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms