RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ERVK-6Q9BXR3 956 aa17.96■□□□□ 0.47
SPC24-206ENST00000592540 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
SPC24-206ENST00000592540 SLC52A3Q9NQ40 469 aa17.96■□□□□ 0.47
SPC24-206ENST00000592540 VWA7Q9Y334 891 aa17.96■□□□□ 0.47
SPC24-206ENST00000592540 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
SPC24-206ENST00000592540 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 H0YAE9 185 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 PPP6CO00743 305 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 CDK14O94921 469 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 MT-ND1P03886 318 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 FGF4P08620 206 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 BDNFP23560 247 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 AXLP30530 894 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 GRIK4Q16099 956 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 CYP2A13Q16696 494 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 BLOC1S3Q6QNY0 202 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 PTRH1Q86Y79 214 aaKnown RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 ARHGAP12Q8IWW6 846 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 DCP1BQ8IZD4 617 aaKnown RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 SFRP1Q8N474 314 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 CALML6Q8TD86 181 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 MRGPRX2Q96LB1 330 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 SLC30A3Q99726 388 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 C16orf70Q9BSU1 422 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 TRIM54Q9BYV2 358 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 GPN2Q9H9Y4 310 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 CNGB3Q9NQW8 809 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 SDR39U1Q9NRG7 319 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 PSME2Q9UL46 239 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 POLR2AP24928 1970 aaKnown RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 USP2O75604 605 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 WISP3O95389 354 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 UMPSP11172 480 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 MLLT10P55197 1068 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 FOXA1P55317 472 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 NFKB2Q00653 900 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 TUBA3CQ13748 450 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 RABL3Q5HYI8 236 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 COQ5Q5HYK3 327 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 NOMO2Q5JPE7 1267 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 IL31Q6EBC2 164 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 IGFN1Q86VF2 1251 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 BPIFB6Q8NFQ5 453 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 DNAJB14Q8TBM8 379 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 RAB2BQ8WUD1 216 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 MUS81Q96NY9 551 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 KCTD14Q9BQ13 255 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
SPC24-206ENST00000592540 SEPT3Q9UH03 358 aa17.95■□□□□ 0.46
SPC24-206ENST00000592540 NYNRINQ9P2P1 1898 aaKnown RBP17.94■□□□□ 0.46
SPC24-206ENST00000592540 H0Y858 1186 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 H3BRB1 525 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 ALBP02768 609 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 CDKN2DP55273 166 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 LIPEQ05469 1076 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 RPS6KA2Q15349 733 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 GEN1Q17RS7 908 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 BROXQ5VW32 411 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 WSCD1Q658N2 575 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 XAF1Q6GPH4 301 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 PTERQ96BW5 349 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 CSF3RQ99062 836 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 SMOQ99835 787 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 MID1IP1Q9NPA3 183 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 TLR9Q9NR96 1032 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 OAS3Q9Y6K5 1087 aaKnown RBP17.94■□□□□ 0.46
SPC24-206ENST00000592540 AZIN1O14977 448 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 MATN3O15232 486 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 MAFKO60675 156 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 HLA-DQB2P05538 268 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 LBPP18428 481 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 SOX11P35716 441 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 BAG6P46379 1132 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 NFYCQ13952 458 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 LEMD2Q8NC56 503 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
SPC24-206ENST00000592540 EXT2Q93063 718 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 TUBGCP3Q96CW5 907 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 LHPPQ9H008 270 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 GMIPQ9P107 970 aa17.94■□□□□ 0.46
SPC24-206ENST00000592540 KCNH1O95259 989 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 HGFP14210 728 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 SNX17Q15036 470 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 ZIK1Q3SY52 487 aaPredicted RBP17.93■□□□□ 0.46
SPC24-206ENST00000592540 PPTC7Q8NI37 304 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 OSCP1Q8WVF1 389 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 RNF34Q969K3 372 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 NRBF2Q96F24 287 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 ASB2Q96Q27 587 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 SEPHS2Q99611 448 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 TUBB1Q9H4B7 451 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 CRTAC1Q9NQ79 661 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 TMEM30AQ9NV96 361 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 RBM22Q9NW64 420 aaKnown RBP eCLIP17.93■□□□□ 0.464e-6■□□□□ 10.1
SPC24-206ENST00000592540 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 TMEM247A6NEH6 219 aa17.93■□□□□ 0.46
SPC24-206ENST00000592540 SYNCRIPO60506 623 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms