RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RGSL1A5PLK6 1076 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TMEM202A6NGA9 273 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TNFRSF10CO14798 259 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 INPP4BO15327 924 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZSCAN12O43309 604 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 EPOP01588 193 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 JUPP14923 745 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GM2AP17900 193 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ACTN2P35609 894 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TRIM23P36406 574 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GNPDA1P46926 289 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SPINT3P49223 89 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 E2F1Q01094 437 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 DPTQ07507 201 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 BIRC2Q13490 618 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 NR0B2Q15466 257 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 MEI1Q5TIA1 1274 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ALS2CLQ60I27 953 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZCCHC8Q6NZY4 707 aaKnown RBP10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF662Q6ZS27 426 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF765Q7L2R6 523 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 CBARPQ8N350 705 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GALNT15Q8N3T1 639 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 FAM71DQ8N9W8 422 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 MAIP1Q8WWC4 291 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 OR1E3Q8WZA6 343 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 HIC2Q96JB3 615 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 APOLD1Q96LR9 279 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TBATAQ96M53 351 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SPATA13Q96N96 652 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TRIB3Q96RU7 358 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 LYSMD1Q96S90 227 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 LRRC61Q9BV99 259 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 FICDQ9BVA6 458 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SCNM1Q9BWG6 230 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 LGR4Q9BXB1 951 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SPATA16Q9BXB7 569 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 TEX101Q9BY14 249 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 FRMD8P1Q9BZ68 369 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ABCG4Q9H172 646 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GBA3Q9H227 469 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GPR34Q9UPC5 381 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF148Q9UQR1 794 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF711Q9Y462 761 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 GPSM3Q9Y4H4 160 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 CACNA1GO43497 2377 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 SHROOM3Q8TF72 1996 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PRSS38A1L453 326 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 LMO7DNF2Z398 122 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TPP1O14773 563 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 YY2O15391 372 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PSMD3O43242 534 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 CEP104O60308 925 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 GCATO75600 419 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TOP3BO95985 862 aaKnown RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 AGTP01019 485 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 FGF1P05230 155 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 HLA-DPA1P20036 260 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PSMB4P28070 264 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TEAD1P28347 426 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 LMAN1P49257 510 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 CDK3Q00526 305 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 ILF3Q12906 894 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 LVRNQ6Q4G3 990 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 KDELC1Q6UW63 502 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 DHRS13Q6UX07 377 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 MARK2Q7KZI7 788 aaKnown RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 NLRP8Q86W28 1048 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 SLC13A5Q86YT5 568 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 RAVER1Q8IY67 606 aaKnown RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PELI3Q8N2H9 469 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 SDR16C5Q8N3Y7 309 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TAB3Q8N5C8 712 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 FAM46DQ8NEK8 389 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 BLOC1S5Q8TDH9 187 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TADA1Q96BN2 335 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 OXNAD1Q96HP4 312 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 MRGPRX2Q96LB1 330 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 GSDMCQ9BYG8 508 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 CDH19Q9H159 772 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TRABDQ9H4I3 376 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 CAAP1Q9H8G2 361 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 USP29Q9HBJ7 922 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 FGF22Q9HCT0 170 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 MRPL40Q9NQ50 206 aaKnown RBP10.03□□□□□ -0.8
BRCA1-227ENST00000591849 HACD3Q9P035 362 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 TMEM98Q9Y2Y6 226 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PKP3Q9Y446 797 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 PCDHGA1Q9Y5H4 931 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 ZZEF1O43149 2961 aa10.03□□□□□ -0.8
BRCA1-227ENST00000591849 LOC285095A0A1B0GVY8 99 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TCRBV7S2A1N4TA0A589 114 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms