RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TTC30BQ8N4P2 665 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 TAAR1Q96RJ0 339 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 TUBA1CQ9BQE3 449 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ZBTB20Q9HC78 741 aaPredicted RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 MAP10Q9P2G4 905 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 ERVK-18Q9QC07 812 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CRNNQ9UBG3 495 aaPredicted RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 UTS2RQ9UKP6 389 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 MTF2Q9Y483 593 aaPredicted RBP15.17■□□□□ 0.02
CIRBP-228ENST00000590347 RIPK3Q9Y572 518 aa15.17■□□□□ 0.02
CIRBP-228ENST00000590347 CENPXA8MT69 81 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 POLBP06746 335 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 PGAM1P18669 254 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 TBXAS1P24557 533 aaPredicted RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 IL12AP29459 219 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 ACTR2P61160 394 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 TRAP1Q12931 704 aaKnown RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 INSCQ1MX18 579 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 METTL4Q8N3J2 472 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 AGBL3Q8NEM8 1001 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 TRPV3Q8NET8 790 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 OR13J1Q8NGT2 312 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 S100ZQ8WXG8 99 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 TSNARE1Q96NA8 513 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 FRMD8P1Q9BZ68 369 aaPredicted RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 CHST12Q9NRB3 414 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 KRT87PA6NCN2 255 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 SPATA31C2B4DYI2 1134 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 PPP6CO00743 305 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 UPK1BO75841 260 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 CCDC159P0C7I6 412 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 CAPN3P20807 821 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 RFC2P35250 354 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 ZNF132P52740 706 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 OR2B6P58173 313 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 KDELC2Q7Z4H8 507 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 THAP5Q7Z6K1 395 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 PCNPQ8WW12 178 aaKnown RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 JPH3Q8WXH2 748 aaPredicted RBP15.16■□□□□ 0.02
CIRBP-228ENST00000590347 PROX1Q92786 737 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 CD320Q9NPF0 282 aa15.16■□□□□ 0.02
CIRBP-228ENST00000590347 CENPBD1B2RD01 187 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GFAPP14136 432 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 LIMK2P53671 638 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 HMGCS2P54868 508 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 EMX1Q04741 257 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TSTD2Q5T7W7 516 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 ZYG11AQ6WRX3 759 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 SPRED1Q7Z699 444 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TMEM151AQ8N4L1 468 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 ESX1Q8N693 406 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GLB1L3Q8NCI6 653 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TEPSINQ96N21 525 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GPR78Q96P69 363 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 NODALQ96S42 347 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 EIF3LQ9Y262 564 aaKnown RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 A0A0J9YYE9 177 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 PDHXO00330 501 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GPD1P21695 349 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 HK2P52789 917 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TAP1Q03518 808 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 NPTX1Q15818 432 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 ZNF699Q32M78 642 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TKFCQ3LXA3 575 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 AASDHQ4L235 1098 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 SWSAP1Q6NVH7 229 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GALNT5Q7Z7M9 940 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 DENND6AQ8IWF6 608 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 C8orf59Q8N0T1 100 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 OR6F1Q8NGZ6 308 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 TMBIM1Q969X1 311 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 MYRFLQ96LU7 910 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 DNMT3AQ9Y6K1 912 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 RNF103O00237 685 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 GSTM2P28161 218 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 DAB2P98082 770 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 SMN1Q16637 294 aaKnown RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 NOL9Q5SY16 702 aaKnown RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 C6orf141Q5SZD1 244 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 FAM183BPQ6ZVS7 135 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 CEP97Q8IW35 865 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 SCUBE3Q8IX30 993 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 LSMEM1Q8N8F7 131 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 CHDHQ8NE62 594 aaPredicted RBP15.15■□□□□ 0.02
CIRBP-228ENST00000590347 RHOXF1Q8NHV9 184 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 OR2B2Q9GZK3 357 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 QPCTLQ9NXS2 382 aa15.15■□□□□ 0.02
CIRBP-228ENST00000590347 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
CIRBP-228ENST00000590347 SEMA3DO95025 777 aa15.14■□□□□ 0.01
CIRBP-228ENST00000590347 PGLSO95336 258 aa15.14■□□□□ 0.01
CIRBP-228ENST00000590347 ALDOCP09972 364 aaKnown RBP15.14■□□□□ 0.01
CIRBP-228ENST00000590347 UQCRC1P31930 480 aa15.14■□□□□ 0.01
CIRBP-228ENST00000590347 KRT6CP48668 564 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 250.2 ms