RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PCDHGA12O60330 932 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 HOXC4P09017 264 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-212ENST00000590096 KELP23276 732 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 TEAD1P28347 426 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 EPHA8P29322 1005 aaPredicted RBP21.23■□□□□ 0.99
ATG4D-212ENST00000590096 HMGCLP35914 325 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 ID4P47928 161 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 TTC27Q6P3X3 843 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 ENPP7Q6UWV6 458 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 HEATR4Q86WZ0 1026 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 PELI3Q8N2H9 469 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 GRK7Q8WTQ7 553 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 FUBP1Q96AE4 644 aaKnown RBP21.23■□□□□ 0.99
ATG4D-212ENST00000590096 EID2BQ96D98 161 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 WDR92Q96MX6 357 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 DLL3Q9NYJ7 618 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 NCOR2Q9Y618 2525 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 AURKAO14965 403 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 MYCLP1P12525 358 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-212ENST00000590096 CD59P13987 128 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 PAFAH1B1P43034 410 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 FNTAP49354 379 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 HNRNPKP61978 463 aaKnown RBP eCLIP21.22■□□□□ 0.99
ATG4D-212ENST00000590096 BASP1P80723 227 aaKnown RBP21.22■□□□□ 0.99
ATG4D-212ENST00000590096 SEMA5AQ13591 1074 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 PUM1Q14671 1186 aaKnown RBP eCLIP21.22■□□□□ 0.99
ATG4D-212ENST00000590096 SHBQ15464 509 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 INAVAQ3KP66 663 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 ZNF542PQ5EBM4 170 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 SYT10Q6XYQ8 523 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 ERMP1Q7Z2K6 904 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 ARNT2Q9HBZ2 717 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 RNF14Q9UBS8 474 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 KLQ9UEF7 1012 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 PKP3Q9Y446 797 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 SPTBN2O15020 2390 aa21.22■□□□□ 0.99
ATG4D-212ENST00000590096 C2orf81A6NN90 581 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 FANCGO15287 622 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 FLRT2O43155 660 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 KRT14P02533 472 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 CSF2P04141 144 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 NME1P15531 152 aaKnown RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 JUNDP17535 347 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 BLKP51451 505 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 DCDC1P59894 354 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 CDK3Q00526 305 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 PPARDQ03181 441 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 BNIP3Q12983 259 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 EIF2B5Q13144 721 aaKnown RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 TAF1AQ15573 450 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 TRIP13Q15645 432 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 HENMT1Q5T8I9 393 aaKnown RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 ZDHHC20Q5W0Z9 365 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 ALS2CLQ60I27 953 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 DENND5AQ6IQ26 1287 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 ADAMTSL4Q6UY14 1074 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 PPP1R21Q6ZMI0 780 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 CREG2Q8IUH2 290 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 TTC30BQ8N4P2 665 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 BRSK1Q8TDC3 778 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 SAP25Q8TEE9 199 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 SETD7Q8WTS6 366 aaKnown RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 BTN2A2Q8WVV5 523 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 SPATA16Q9BXB7 569 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 TEX101Q9BY14 249 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 SLC32A1Q9H598 525 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 BPIFA1Q9NP55 256 aa21.21■□□□□ 0.99
ATG4D-212ENST00000590096 NFKBIL1Q9UBC1 381 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-212ENST00000590096 STX7O15400 261 aaKnown RBP21.2■□□□□ 0.98
ATG4D-212ENST00000590096 SDC3O75056 442 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 CRTAMO95727 393 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 GAS8O95995 478 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 SOD1P00441 154 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 APRTP07741 180 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 BPIP17213 487 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 PDE1BQ01064 536 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 GATAD2AQ86YP4 633 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 NAXDQ8IW45 347 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 PHACTR4Q8IZ21 702 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 DNAAF3Q8N9W5 541 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 GPR26Q8NDV2 337 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 OR56A4Q8NGH8 313 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 C16orf45Q96MC5 204 aaPredicted RBP21.2■□□□□ 0.98
ATG4D-212ENST00000590096 AGAP2Q99490 1192 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 ZSCAN5AQ9BUG6 496 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 LGR4Q9BXB1 951 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 SLC13A1Q9BZW2 595 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.2■□□□□ 0.98
ATG4D-212ENST00000590096 ARL5AQ9Y689 179 aa21.2■□□□□ 0.98
ATG4D-212ENST00000590096 TDRD6O60522 2096 aaKnown RBP21.2■□□□□ 0.98
ATG4D-212ENST00000590096 SCN8AQ9UQD0 1980 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 TM4SF5O14894 197 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 SH3BP5O60239 455 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 PPFIA2O75334 1257 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 PIAS2O75928 621 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 SUN1O94901 812 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 RASGRP1O95267 797 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 LPOP22079 712 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-212ENST00000590096 GRK6P43250 576 aa21.19■□□□□ 0.98
ATG4D-212ENST00000590096 VPS41P49754 854 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms