RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PROSCO94903 275 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ZIC2O95409 532 aaPredicted RBP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ECEL1O95672 775 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 TRBC1P01850 177 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 TEAD1P28347 426 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 HNRNPH3P31942 346 aaKnown RBP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 CTBSQ01459 385 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ITKQ08881 620 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 EIF3IQ13347 325 aaKnown RBP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ARHGEF7Q14155 803 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 LY6DQ14210 128 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 DOK6Q6PKX4 331 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 SLC30A9Q6PML9 568 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 USP45Q70EL2 814 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 LRRC49Q8IUZ0 686 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 NAGSQ8N159 534 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ZDHHC1Q8WTX9 485 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 NSMCE1Q8WV22 266 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 SCARF2Q96GP6 870 aaPredicted RBP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 STRADBQ9C0K7 418 aa17.95■□□□□ 0.46
H3F3B-209ENST00000589949 RBM22Q9NW64 420 aaKnown RBP eCLIP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 TRNAU1APQ9NX07 287 aaKnown RBP17.95■□□□□ 0.46
H3F3B-209ENST00000589949 ZNF462Q96JM2 2506 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 HLA-DQB2P05538 268 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 IVLP07476 585 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 STC1P52823 247 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 RHDQ02161 417 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 CFHR1Q03591 330 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 C16orf72Q14CZ0 275 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 ASTE1Q2TB18 679 aaPredicted RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 ZSCAN23Q3MJ62 389 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 AMZ1Q400G9 498 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 ADAMTSL4Q6UY14 1074 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 USP53Q70EK8 1073 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 JAMLQ86YT9 394 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 KCTD6Q8NC69 237 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 RAPGEF5Q92565 580 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 CCDC97Q96F63 343 aaPredicted RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 WDR24Q96S15 920 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 NUDT22Q9BRQ3 303 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 ZNF670Q9BS34 389 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 TDRD1Q9BXT4 1180 aaKnown RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 GSDMCQ9BYG8 508 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 XPO4Q9C0E2 1151 aaKnown RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 POLR1EQ9GZS1 481 aaKnown RBP17.94■□□□□ 0.46
H3F3B-209ENST00000589949 FOXJ2Q9P0K8 574 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 CTTNBP2NLQ9P2B4 639 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 ACSL6Q9UKU0 697 aa17.94■□□□□ 0.46
H3F3B-209ENST00000589949 AHCTF1Q8WYP5 2266 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 PRAMEF33A0A0G2JMD5 474 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 TMX2-CTNND1H3BSU7 103 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 PPM1DO15297 605 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 PRAMEF10O60809 474 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 CLDN7O95471 211 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 MMP2P08253 660 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 KRT10P13645 584 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 CCNCP24863 283 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 CD1CP29017 333 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 ALDH4A1P30038 563 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 GPR1P46091 355 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 TPM4P67936 248 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 ILF3Q12906 894 aaKnown RBP eCLIP17.93■□□□□ 0.46
H3F3B-209ENST00000589949 NR1D2Q14995 579 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 HADHQ16836 314 aaKnown RBP17.93■□□□□ 0.46
H3F3B-209ENST00000589949 TAF1BQ53T94 588 aaPredicted RBP17.93■□□□□ 0.46
H3F3B-209ENST00000589949 KIAA1524Q8TCG1 905 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 FATE1Q969F0 183 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 AP2M1Q96CW1 435 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 RIOK2Q9BVS4 552 aaKnown RBP17.93■□□□□ 0.46
H3F3B-209ENST00000589949 KCTD5Q9NXV2 234 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 DTLQ9NZJ0 730 aa17.93■□□□□ 0.46
H3F3B-209ENST00000589949 CAPN8A6NHC0 703 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 C9orf172C9J069 976 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 NVLO15381 856 aaKnown RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 EML2O95834 649 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 JMJD7P0C870 316 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 CCL4P13236 92 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 PDK2Q15119 407 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 PYCR3Q53H96 274 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 PHF19Q5T6S3 580 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 NKAIN2Q5VXU1 208 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 CCDC81Q6ZN84 652 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 MARK2Q7KZI7 788 aaKnown RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 ZFAND4Q86XD8 727 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 CNTD1Q8N815 330 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 USP7Q93009 1102 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 PMEPA1Q969W9 287 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 COX14Q96I36 57 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 CCNL2Q96S94 520 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 CNOT6Q9ULM6 557 aaKnown RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 TTLL3Q9Y4R7 772 aa17.92■□□□□ 0.46
H3F3B-209ENST00000589949 OAS3Q9Y6K5 1087 aaKnown RBP17.92■□□□□ 0.46
H3F3B-209ENST00000589949 IGHV5-10-1A0A0J9YXX1 117 aa17.91■□□□□ 0.46
H3F3B-209ENST00000589949 RHPN2P1A8MT19 583 aa17.91■□□□□ 0.46
H3F3B-209ENST00000589949 KCNK1O00180 336 aa17.91■□□□□ 0.46
H3F3B-209ENST00000589949 INPP4BO15327 924 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms